RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 TSPAN6O43657 245 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 RAD1O60671 282 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 PAGE1O75459 146 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 CLDN11O75508 207 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 PDGFAP04085 211 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 RHOCP08134 193 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 GLB1P16278 677 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 MTIF2P46199 727 aaKnown RBP9.82□□□□□ -0.84
PHGDH-212ENST00000641247 DNA2P51530 1060 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 CCNHP51946 323 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-212ENST00000641247 CDH4P55283 916 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 MARSP56192 900 aaKnown RBP9.82□□□□□ -0.84
PHGDH-212ENST00000641247 OR1D5P58170 312 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 YWHAZP63104 245 aaKnown RBP9.82□□□□□ -0.84
PHGDH-212ENST00000641247 KRT83P78385 493 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 KLRB1Q12918 225 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 ELOCQ15369 112 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 DEFB109BQ30KR1 87 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 CARD16Q5EG05 197 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 CERCAMQ5T4B2 595 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 OTUD1Q5VV17 481 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-212ENST00000641247 ENPP7Q6UWV6 458 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 SRRM1Q8IYB3 904 aaKnown RBP9.82□□□□□ -0.84
PHGDH-212ENST00000641247 FSTL5Q8N475 847 aaPredicted RBP9.82□□□□□ -0.84
PHGDH-212ENST00000641247 IL22RA1Q8N6P7 574 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 CCL4L1Q8NHW4 92 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 TMEM159Q96B96 161 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 PPP1R16AQ96I34 528 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 NUDT22Q9BRQ3 303 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 TUBGCP2Q9BSJ2 902 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 B3GNT4Q9C0J1 378 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 SIK2Q9H0K1 926 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 VPS16Q9H269 839 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 ZNF768Q9H5H4 540 aaKnown RBP9.82□□□□□ -0.84
PHGDH-212ENST00000641247 ACP6Q9NPH0 428 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 TAB2Q9NYJ8 693 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 MPP6Q9NZW5 540 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 LRIT1Q9P2V4 623 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 IMPACTQ9P2X3 320 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 COQ6Q9Y2Z9 468 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 PCDHGA3Q9Y5H0 932 aa9.82□□□□□ -0.84
PHGDH-212ENST00000641247 IGHV5-10-1A0A0J9YXX1 117 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 DRGXA6NNA5 263 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 ZNF891A8MT65 544 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 LGALS16A8MUM7 142 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 TEX33O43247 280 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 GRAP2O75791 330 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 CTSEP14091 401 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 MPSTP25325 297 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 TNFRSF8P28908 595 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 CCR1P32246 355 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 RECQLP46063 649 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 ATP1A2P50993 1020 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 CLCN6P51797 869 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 TUBB4BP68371 445 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 HLTFQ14527 1009 aaKnown RBP eCLIP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 IRF4Q15306 451 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 MAN2A1Q16706 1144 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 AMZ1Q400G9 498 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 CCDC40Q4G0X9 1142 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 LACTB2Q53H82 288 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 TIPARPQ7Z3E1 657 aaKnown RBP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 TMEM110Q86TL2 294 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 GKN2Q86XP6 184 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 CACNA2D3Q8IZS8 1091 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 WDTC1Q8N5D0 677 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 SLC45A3Q96JT2 553 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 CCDC114Q96M63 670 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 CATSPER2Q96P56 530 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 TAAR9Q96RI9 348 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 C2orf49Q9BVC5 232 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 ZDHHC6Q9H6R6 413 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 METTL14Q9HCE5 456 aaKnown RBP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 MRPL40Q9NQ50 206 aaKnown RBP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 DDIT4Q9NX09 232 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 OCIAD1Q9NX40 245 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 HECAQ9UBI9 543 aaPredicted RBP9.81□□□□□ -0.84
PHGDH-212ENST00000641247 ZNF212Q9UDV6 495 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 SLC12A6Q9UHW9 1150 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 ITPR2Q14571 2701 aa9.81□□□□□ -0.84
PHGDH-212ENST00000641247 ABCA12Q86UK0 2595 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 LRRK1Q38SD2 2015 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 WIPF3A6NGB9 483 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 ALPIP09923 528 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 EPB41P11171 864 aaKnown RBP9.8□□□□□ -0.84
PHGDH-212ENST00000641247 TNNT1P13805 278 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 PNLIPP16233 465 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 TFE3P19532 575 aaPredicted RBP9.8□□□□□ -0.84
PHGDH-212ENST00000641247 F8A1P23610 371 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 CD1CP29017 333 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 PBX1P40424 430 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 SERPINH1P50454 418 aaKnown RBP9.8□□□□□ -0.84
PHGDH-212ENST00000641247 RIPPLY3P57055 190 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 SRP54P61011 504 aaKnown RBP9.8□□□□□ -0.84
PHGDH-212ENST00000641247 UBXN1Q04323 297 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 CDC20Q12834 499 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 WSCD2Q2TBF2 565 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 VWA3BQ502W6 1294 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 MIIPQ5JXC2 388 aa9.8□□□□□ -0.84
PHGDH-212ENST00000641247 TMEM164Q5U3C3 297 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms