RNA–Protein interactions for RNA: ENST00000640154.1

CGREF1-209, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

TSL 5 BASIC

Gene CGREF1, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-209ENST00000640154 GATA6Q92908 595 aa12.23□□□□□ -0.45
CGREF1-209ENST00000640154 MRFAP1L1Q96HT8 127 aa12.23□□□□□ -0.45
CGREF1-209ENST00000640154 TSGA13Q96PP4 275 aa12.23□□□□□ -0.45
CGREF1-209ENST00000640154 NUDCD1Q96RS6 583 aa12.23□□□□□ -0.45
CGREF1-209ENST00000640154 MGME1Q9BQP7 344 aa12.23□□□□□ -0.45
CGREF1-209ENST00000640154 WRAP53Q9BUR4 548 aaKnown RBP12.23□□□□□ -0.45
CGREF1-209ENST00000640154 RBSNQ9H1K0 784 aa12.23□□□□□ -0.45
CGREF1-209ENST00000640154 PCDHGA1Q9Y5H4 931 aa12.23□□□□□ -0.45
CGREF1-209ENST00000640154 ARHGEF17Q96PE2 2063 aaPredicted RBP12.23□□□□□ -0.45
CGREF1-209ENST00000640154 MYLKQ15746 1914 aa12.23□□□□□ -0.45
CGREF1-209ENST00000640154 LRP4O75096 1905 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 A0A1W2PQ67 120 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 TMEM110-MUSTN1A8MSY1 372 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 ENC1O14682 589 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 SDC3O75056 442 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 PIAS2O75928 621 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 LCA5LO95447 670 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 LDOC1O95751 146 aaPredicted RBP12.22□□□□□ -0.45
CGREF1-209ENST00000640154 CSF2P04141 144 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 C1SP09871 688 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 C6P13671 934 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 NME1P15531 152 aaKnown RBP12.22□□□□□ -0.45
CGREF1-209ENST00000640154 KDELR1P24390 212 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 GARSP41250 739 aaKnown RBP12.22□□□□□ -0.45
CGREF1-209ENST00000640154 MMP13P45452 471 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 ZNF75DP51815 510 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 HADHBP55084 474 aaKnown RBP12.22□□□□□ -0.45
CGREF1-209ENST00000640154 YPEL5P62699 121 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 POLR2LP62875 67 aaKnown RBP12.22□□□□□ -0.45
CGREF1-209ENST00000640154 ZNF211Q13398 564 aaPredicted RBP12.22□□□□□ -0.45
CGREF1-209ENST00000640154 MARC1Q5VT66 337 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 LRRC38Q5VT99 294 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 PARGQ86W56 976 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 PQLC3Q8N755 202 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 NSMCE1Q8WV22 266 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 RAPGEF5Q92565 580 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 MAML1Q92585 1016 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 CNDP2Q96KP4 475 aaKnown RBP12.22□□□□□ -0.45
CGREF1-209ENST00000640154 ZFYVE26Q68DK2 2539 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 CELSR3Q9NYQ7 3312 aa12.22□□□□□ -0.45
CGREF1-209ENST00000640154 FAM208BQ5VWN6 2430 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 URB1O60287 2271 aaKnown RBP12.21□□□□□ -0.45
CGREF1-209ENST00000640154 TRIM38O00635 465 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 PROS1P07225 676 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 GIMD1P0DJR0 217 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 FECHP22830 423 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 SLC1A1P43005 524 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 LIG3P49916 1009 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 HNRNPKP61978 463 aaKnown RBP eCLIP12.21□□□□□ -0.45
CGREF1-209ENST00000640154 RALGDSQ12967 914 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 PDE1CQ14123 709 aaPredicted RBP12.21□□□□□ -0.45
CGREF1-209ENST00000640154 IRF4Q15306 451 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 IFI16Q16666 785 aaKnown RBP12.21□□□□□ -0.45
CGREF1-209ENST00000640154 WSCD2Q2TBF2 565 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 PROX2Q3B8N5 592 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 TPRG1LQ5T0D9 272 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 ALG1LQ6GMV1 187 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 UNQ6494/PRO21346Q6UXR6 183 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 CCNI2Q6ZMN8 369 aaPredicted RBP12.21□□□□□ -0.45
CGREF1-209ENST00000640154 KDM7AQ6ZMT4 941 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 DPPA4Q7L190 304 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 TMPRSS7Q7RTY8 843 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 CCDC170Q8IYT3 715 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 OR4C6Q8NH72 309 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 RNF157Q96PX1 679 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 PANX2Q96RD6 677 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 NOD2Q9HC29 1040 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 SCUBE2Q9NQ36 999 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 MBNL1Q9NR56 388 aaKnown RBP12.21□□□□□ -0.45
CGREF1-209ENST00000640154 UCKL1Q9NWZ5 548 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 DNAJC28Q9NX36 388 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 AMACRQ9UHK6 382 aa12.21□□□□□ -0.45
CGREF1-209ENST00000640154 TTC24A2A3L6 582 aaPredicted RBP12.2□□□□□ -0.46
CGREF1-209ENST00000640154 TMEM8BA6NDV4 472 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 C3orf70A6NLC5 250 aaPredicted RBP12.2□□□□□ -0.46
CGREF1-209ENST00000640154 GOLGA8CPA6NN73 597 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 C1QTNF9BB2RNN3 333 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 SCAMP1O15126 338 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 MATN3O15232 486 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 SIGLEC6O43699 453 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 PRKCGP05129 697 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 C1QTNF9P0C862 333 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 CDK4P11802 303 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 CKMT2P17540 419 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 MX2P20592 715 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 CCNCP24863 283 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 MAGEA1P43355 309 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 ACADVLP49748 655 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 PEX5P50542 639 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 THOP1P52888 689 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 GBE1Q04446 702 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 SLC10A2Q12908 348 aaPredicted RBP12.2□□□□□ -0.46
CGREF1-209ENST00000640154 TRAF2Q12933 501 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 EIF2B5Q13144 721 aaKnown RBP12.2□□□□□ -0.46
CGREF1-209ENST00000640154 PTK2BQ14289 1009 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 LRRC14Q15048 493 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 SMAD1Q15797 465 aaKnown RBP12.2□□□□□ -0.46
CGREF1-209ENST00000640154 ZNF542PQ5EBM4 170 aa12.2□□□□□ -0.46
CGREF1-209ENST00000640154 TIGD7Q6NT04 549 aaPredicted RBP12.2□□□□□ -0.46
CGREF1-209ENST00000640154 LIPIQ6XZB0 460 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms