RNA–Protein interactions for RNA: ENST00000638959.1

LMBR1-222, Transcript of limb development membrane protein 1, human

TSL 5 BASIC

Gene LMBR1, Length 93 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMBR1-222	ENST00000638959	VIP	P01282	170 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	IGHV3-13	P01766	116 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	PIGA	P37287	484 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	GUCY2F	P51841	1108 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	EPHB1	P54762	984 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	KRTAP12-4	P60329	112 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	RPL15	P61313	204 aa	Known RBP	0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	ZACN	Q401N2	412 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	FASTKD1	Q53R41	847 aa	Known RBP	0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	BRDT	Q58F21	947 aa	Predicted RBP	0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	RNF44	Q7L0R7	432 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	RNF144B	Q7Z419	303 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	TTC30A	Q86WT1	665 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	CCDC28A	Q8IWP9	274 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	ZBED8	Q8IZ13	594 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	PARD3B	Q8TEW8	1205 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	B3GALT6	Q96L58	329 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	SMAD5	Q99717	465 aa	Known RBP	0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	TMEM120A	Q9BXJ8	343 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	CERS4	Q9HA82	394 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	TRPC5	Q9UL62	973 aa	Predicted RBP	0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	AMDHD2	Q9Y303	409 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	MORC2	Q9Y6X9	1032 aa	Predicted RBP	0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	HIVEP2	P31629	2446 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	AHNAK2	Q8IVF2	5795 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959	UMODL1	Q5DID0	1318 aa		0.61	□□□□□ -2.31
LMBR1-222	ENST00000638959		A0A087WZ62	844 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	FAM220BP	B1ANY3	271 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	KATNA1	O75449	491 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	VIL1	P09327	827 aa	Known RBP	0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	YWHAQ	P27348	245 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	GSTM2	P28161	218 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	CHAT	P28329	748 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	STX2	P32856	288 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	NEDD9	Q14511	834 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	KIAA1644	Q3SXP7	199 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	ARHGAP15	Q53QZ3	475 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	NSUN5P2	Q63ZY6	315 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	TRNP1	Q6NT89	227 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	MARCH9	Q86YJ5	346 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	WDR63	Q8IWG1	891 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	RNF113B	Q8IZP6	322 aa	Known RBP	0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	GPD1L	Q8N335	351 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	CEP70	Q8NHQ1	597 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	DUSP19	Q8WTR2	217 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	CLEC4C	Q8WTT0	213 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	ABTB1	Q969K4	478 aa	Predicted RBP	0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	MCRS1	Q96EZ8	462 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	MGME1	Q9BQP7	344 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	SYT17	Q9BSW7	474 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	HDHD5	Q9BXW7	423 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	B3GNT5	Q9BYG0	378 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	RAD21L1	Q9H4I0	556 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	TMEM30A	Q9NV96	361 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	TUBE1	Q9UJT0	475 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	TPCN1	Q9ULQ1	816 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	KCNJ14	Q9UNX9	436 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	KIF25-AS1	Q9Y6Z4	181 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	KIAA1210	Q9ULL0	1709 aa		0.6	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3D	A0A087WVF3	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3I	A0A087WXS9	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3E	A0A087X179	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3K	A0A087X1G2	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	LOC105369274	A0A096LPK9	316 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	LOC102723532	A0A0G2JNH3	316 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3B	A6NDS4	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3F	A6NER0	549 aa	Predicted RBP	0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	OR2W5	A6NFC9	320 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	C17orf51	A8MQB3	221 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3L	B9A6J9	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	AKR1B15	C9JRZ8	316 aa	Predicted RBP	0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TRAFD1	O14545	582 aa	Predicted RBP	0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	WNT9B	O14905	357 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TNFRSF6B	O95407	300 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	HMBS	P08397	361 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	MELTF	P08582	738 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	CYP3A4	P08684	503 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3H	P0C7X1	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	PLA2G4B	P0C869	781 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	SRGAP2B	P0DMP2	458 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	MYOD1	P15172	320 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	VCAM1	P19320	739 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	RNASEL	Q05823	741 aa	Known RBP	0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	ELAVL2	Q12926	359 aa	Known RBP	0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	CCDC96	Q2M329	555 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	KRTCAP3	Q53RY4	240 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D9B	Q66K14	1250 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3G	Q6DHY5	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3C	Q6IPX1	549 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	APOA5	Q6Q788	366 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	SESTD1	Q86VW0	696 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	SFTPA2	Q8IWL1	248 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TBC1D3	Q8IZP1	549 aa	Predicted RBP	0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	C1orf87	Q8N0U7	546 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	OR4N4	Q8N0Y3	316 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	VPS52	Q8N1B4	723 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	ENDOV	Q8N8Q3	282 aa	Known RBP	0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	ARHGEF26	Q96DR7	871 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	LRRC46	Q96FV0	321 aa		0.59	□□□□□ -2.31
LMBR1-222	ENST00000638959	TRAPPC9	Q96Q05	1148 aa		0.59	□□□□□ -2.31

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