RNA–Protein interactions for RNA: ENST00000638573.1

COLCA2-206, Transcript of colorectal cancer associated 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COLCA2, Length 1,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-206ENST00000638573 RPS21P63220 83 aaKnown RBP16.59■□□□□ 0.25
COLCA2-206ENST00000638573 CYP4F3Q08477 520 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 MMRN1Q13201 1228 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 SMAD1Q15797 465 aaKnown RBP16.59■□□□□ 0.25
COLCA2-206ENST00000638573 PROX2Q3B8N5 592 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 INAVAQ3KP66 663 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 ANKRD20A8PQ5CZ79 823 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 C19orf48Q6RUI8 117 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 VSIG1Q86XK7 387 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 PROSER1Q86XN7 944 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 PLPP6Q8IY26 295 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 FEM1CQ96JP0 617 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 GDAP1L1Q96MZ0 367 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 C1QTNF2Q9BXJ5 285 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 MAK16Q9BXY0 300 aaKnown RBP16.59■□□□□ 0.25
COLCA2-206ENST00000638573 SP110Q9HB58 689 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 GPR27Q9NS67 375 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 ETNK2Q9NVF9 386 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 DNAJC28Q9NX36 388 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 RAXQ9Y2V3 346 aa16.59■□□□□ 0.25
COLCA2-206ENST00000638573 FREM2Q5SZK8 3169 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 A6NNZ2 444 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 SCAMP1O15126 338 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 AP1G1O43747 822 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 RFPL3O75679 317 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 NUDT1P36639 197 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 OVGP1Q12889 678 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 TCEA2Q15560 299 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 KIAA1161Q6NSJ0 714 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 TTC7BQ86TV6 843 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 RBFAQ8N0V3 343 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 RNF10Q8N5U6 811 aaKnown RBP16.58■□□□□ 0.24
COLCA2-206ENST00000638573 TSEN2Q8NCE0 465 aaKnown RBP16.58■□□□□ 0.24
COLCA2-206ENST00000638573 CASKIN2Q8WXE0 1202 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 RAPGEF5Q92565 580 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 PDLIM2Q96JY6 352 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 UBA2Q9UBT2 640 aaPredicted RBP16.58■□□□□ 0.24
COLCA2-206ENST00000638573 TRIM10Q9UDY6 481 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 GUCA1BQ9UMX6 200 aa16.58■□□□□ 0.24
COLCA2-206ENST00000638573 LY6G6EA0A0G2JKS1 128 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 GRID2IPA4D2P6 1211 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 ZNF487B1APH4 448 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 YKT6O15498 198 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 PRAMEF11O60813 436 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 PALMO75781 387 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 IGSF6O95976 241 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 EIF2B5Q13144 721 aaKnown RBP16.57■□□□□ 0.24
COLCA2-206ENST00000638573 PDE1CQ14123 709 aaPredicted RBP16.57■□□□□ 0.24
COLCA2-206ENST00000638573 HES3Q5TGS1 186 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 AFMIDQ63HM1 303 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 KCTD16Q68DU8 428 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 KYAT3Q6YP21 454 aaKnown RBP16.57■□□□□ 0.24
COLCA2-206ENST00000638573 PEX26Q7Z412 305 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 CAMK1DQ8IU85 385 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 CCDC50Q8IVM0 306 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 OXR1Q8N573 874 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 ATPAF2Q8N5M1 289 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 FUBP1Q96AE4 644 aaKnown RBP16.57■□□□□ 0.24
COLCA2-206ENST00000638573 RNF25Q96BH1 459 aaPredicted RBP16.57■□□□□ 0.24
COLCA2-206ENST00000638573 RBM41Q96IZ5 413 aaKnown RBP16.57■□□□□ 0.24
COLCA2-206ENST00000638573 ZNF830Q96NB3 372 aaPredicted RBP16.57■□□□□ 0.24
COLCA2-206ENST00000638573 CCDC86Q9H6F5 360 aaKnown RBP16.57■□□□□ 0.24
COLCA2-206ENST00000638573 AMFRQ9UKV5 643 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 U3KQA8 63 aa16.57■□□□□ 0.24
COLCA2-206ENST00000638573 COL5A1P20908 1838 aaPredicted RBP16.56■□□□□ 0.24
COLCA2-206ENST00000638573 A0A0U1RQJ8 604 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 CCDC66A2RUB6 948 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 APOL1O14791 398 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 CELA2BP08218 269 aaPredicted RBP16.56■□□□□ 0.24
COLCA2-206ENST00000638573 HOXB3P14651 431 aaPredicted RBP16.56■□□□□ 0.24
COLCA2-206ENST00000638573 ZFXP17010 805 aaPredicted RBP16.56■□□□□ 0.24
COLCA2-206ENST00000638573 IL4RP24394 825 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 PFN3P60673 137 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 CCDC15Q0P6D6 951 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 TARDBPQ13148 414 aaKnown RBP eCLIP16.56■□□□□ 0.24
COLCA2-206ENST00000638573 SGCGQ13326 291 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 RFX6Q8HWS3 928 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 KATNAL2Q8IYT4 538 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 PCDH19Q8TAB3 1148 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 NSMCE1Q8WV22 266 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 FAF2Q96CS3 445 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 CRELD1Q96HD1 420 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 RNF157Q96PX1 679 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 ALS2CR12Q96Q35 445 aa16.56■□□□□ 0.24
COLCA2-206ENST00000638573 ARID1BQ8NFD5 2236 aaPredicted RBP16.55■□□□□ 0.24
COLCA2-206ENST00000638573 DMXL2Q8TDJ6 3036 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 SPTY2D1-AS1A0A0U1RR47 76 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 TSPAN6O43657 245 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 MFSD11O43934 449 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 MAGEC1O60732 1142 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 ZRANB2O95218 330 aaKnown RBP eCLIP16.55■□□□□ 0.24
COLCA2-206ENST00000638573 CKMT2P17540 419 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 MX2P20592 715 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 CTNNA1P35221 906 aaKnown RBP16.55■□□□□ 0.24
COLCA2-206ENST00000638573 CETN2P41208 172 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 IL10RBQ08334 325 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 C1orf61Q13536 156 aa16.55■□□□□ 0.24
COLCA2-206ENST00000638573 PAFAH1B3Q15102 231 aaKnown RBP16.55■□□□□ 0.24
COLCA2-206ENST00000638573 PTPRRQ15256 657 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms