RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 CSF2P04141 144 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 PCCBP05166 539 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 CELA2BP08218 269 aaPredicted RBP17.85■□□□□ 0.45
PNKP-230ENST00000638016 JUNDP17535 347 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 SERPINA4P29622 427 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 BCL2L1Q07817 233 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 ELP6Q0PNE2 266 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 ZNF211Q13398 564 aaPredicted RBP17.85■□□□□ 0.45
PNKP-230ENST00000638016 C1orf61Q13536 156 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 DPYSL3Q14195 570 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 ZNF235Q14590 738 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 RFTN1Q14699 578 aaPredicted RBP17.85■□□□□ 0.45
PNKP-230ENST00000638016 HES3Q5TGS1 186 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 NCBP2-AS2Q69YL0 99 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 BRAT1Q6PJG6 821 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 ZSCAN30Q86W11 494 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 ATPAF2Q8N5M1 289 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 LZTR1Q8N653 840 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 PCDH19Q8TAB3 1148 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 FAM71BQ8TC56 605 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 LMX1AQ8TE12 382 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 DEF6Q9H4E7 631 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 PCDHGC4Q9Y5F7 938 aa17.85■□□□□ 0.45
PNKP-230ENST00000638016 A0A0U1RQS6 177 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 TRABD2BA6NFA1 517 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 K7ESM1 405 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 H2AFZP0C0S5 128 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 GM2AP17900 193 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 CR2P20023 1033 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 HNRNPKP61978 463 aaKnown RBP eCLIP17.84■□□□□ 0.45
PNKP-230ENST00000638016 DAB2P98082 770 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 TRAF2Q12933 501 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 TRIM14Q14142 442 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 GRM3Q14832 879 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 DEFB133Q30KQ1 61 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 H2AFVQ71UI9 128 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 DCP2Q8IU60 420 aaKnown RBP17.84■□□□□ 0.45
PNKP-230ENST00000638016 PELI3Q8N2H9 469 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 GALNT15Q8N3T1 639 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 PLA2G15Q8NCC3 412 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 FAM174AQ8TBP5 190 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 CTNNBL1Q8WYA6 563 aaPredicted RBP17.84■□□□□ 0.45
PNKP-230ENST00000638016 FUBP1Q96AE4 644 aaKnown RBP17.84■□□□□ 0.45
PNKP-230ENST00000638016 IFT43Q96FT9 208 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 APOLD1Q96LR9 279 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 SMIM14Q96QK8 99 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 NOD2Q9HC29 1040 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 OR1A2Q9Y585 309 aa17.84■□□□□ 0.45
PNKP-230ENST00000638016 RP1P56715 2156 aa17.83■□□□□ 0.45
PNKP-230ENST00000638016 ANKRD11Q6UB99 2663 aaPredicted RBP17.83■□□□□ 0.44
PNKP-230ENST00000638016 SSU72P8A0A1W2PR75 194 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 CASC3O15234 703 aaKnown RBP17.83■□□□□ 0.44
PNKP-230ENST00000638016 AKR1B10O60218 316 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 GCATO75600 419 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 ACP1P24666 158 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 THOP1P52888 689 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 AP1S1P61966 158 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 NSUN2Q08J23 767 aaKnown RBP eCLIP17.83■□□□□ 0.44
PNKP-230ENST00000638016 MESDQ14696 234 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 LRRC14Q15048 493 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 HADHQ16836 314 aaKnown RBP17.83■□□□□ 0.44
PNKP-230ENST00000638016 ERAP2Q6P179 960 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 PROSER1Q86XN7 944 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 PHACTR4Q8IZ21 702 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.83■□□□□ 0.44
PNKP-230ENST00000638016 PAF1Q8N7H5 531 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 HCAR2Q8TDS4 363 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 PDCD6IPQ8WUM4 868 aaKnown RBP17.83■□□□□ 0.44
PNKP-230ENST00000638016 ZNF599Q96NL3 588 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 MGME1Q9BQP7 344 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 LRRC61Q9BV99 259 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 CCDC86Q9H6F5 360 aaKnown RBP17.83■□□□□ 0.44
PNKP-230ENST00000638016 NLGN3Q9NZ94 848 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 UVRAGQ9P2Y5 699 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 LAMA5O15230 3695 aa17.83■□□□□ 0.44
PNKP-230ENST00000638016 AQP9O43315 295 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 LZTS3O60299 673 aaPredicted RBP17.82■□□□□ 0.44
PNKP-230ENST00000638016 TMEM253P0C7T8 217 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 INSM1Q01101 510 aaPredicted RBP17.82■□□□□ 0.44
PNKP-230ENST00000638016 GBE1Q04446 702 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 CYP4F3Q08477 520 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 TARDBPQ13148 414 aaKnown RBP eCLIP17.82■□□□□ 0.44
PNKP-230ENST00000638016 IHHQ14623 411 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 INPP5AQ14642 412 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 LIPIQ6XZB0 460 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 TMPRSS12Q86WS5 348 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 PQLC3Q8N755 202 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 SLC35G2Q8TBE7 412 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 RAPGEF5Q92565 580 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 TSACCQ96A04 125 aaPredicted RBP17.82■□□□□ 0.44
PNKP-230ENST00000638016 NUDCD1Q96RS6 583 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 C1QTNF7Q9BXJ2 289 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 CLPBQ9H078 707 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 NHEJ1Q9H9Q4 299 aaPredicted RBP17.82■□□□□ 0.44
PNKP-230ENST00000638016 NT5MQ9NPB1 228 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 SCUBE2Q9NQ36 999 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 RCOR3Q9P2K3 495 aaPredicted RBP17.82■□□□□ 0.44
PNKP-230ENST00000638016 B4GALT6Q9UBX8 382 aa17.82■□□□□ 0.44
PNKP-230ENST00000638016 APOBEC3BQ9UH17 382 aaKnown RBP17.82■□□□□ 0.44
PNKP-230ENST00000638016 HYOU1Q9Y4L1 999 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms