RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 SLC9A9Q8IVB4 645 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 UBA2Q9UBT2 640 aaPredicted RBP17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 PCDHGA6Q9Y5G7 932 aa17.08■□□□□ 0.32
CACNA1A-253ENST00000637927 QSOX1O00391 747 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 STX11O75558 287 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 MPOP05164 745 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 USP4Q13107 963 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 CCDC153Q494R4 210 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 CD302Q8IX05 232 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 CPT1CQ8TCG5 803 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 DNASE1L2Q92874 299 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 CYP3A43Q9HB55 503 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 KANSL3Q9P2N6 904 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TMX2Q9Y320 296 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 RECQL4O94761 1208 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 ASMTP46597 345 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 MTTPP55157 894 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 SCN1BQ07699 218 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 OCLNQ16625 522 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TCEAL6Q6IPX3 200 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 KANSL1Q7Z3B3 1105 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 EPS8L2Q9H6S3 715 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 REEP1Q9H902 201 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 PNO1Q9NRX1 252 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 ATAD3AQ9NVI7 634 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 CCDC182A6NF36 153 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 NRP2O60462 931 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 RSL1D1O76021 490 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 PRH1P02810 166 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 VEGFAP15692 232 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 YAP1P46937 504 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 AP1S2P56377 157 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 USP46P62068 366 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 VGLL4Q14135 290 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 PHF19Q5T6S3 580 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 FRRS1Q6ZNA5 592 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 DHFR2Q86XF0 187 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 RASGRP3Q8IV61 690 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 BOLLQ8N9W6 283 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 POF1BQ8WVV4 589 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 ULBP1Q9BZM6 244 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 CNTNAP4Q9C0A0 1308 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 A0A087X0B3 334 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 WWP2O00308 870 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 CCNDBP1O95273 360 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TRIM28Q13263 835 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TBX5Q99593 518 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 ACP6Q9NPH0 428 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TAGLN3Q9UI15 199 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 HIF3AQ9Y2N7 669 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TRPV2Q9Y5S1 764 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TTI2Q6NXR4 508 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 Q8N9G6 341 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 PLEKHA1Q9HB21 404 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 ASF1AQ9Y294 204 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 SF3B1O75533 1304 aaKnown RBP eCLIP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 ADGRB3O60242 1522 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 A0A088AWK7 358 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 EIF1AYO14602 144 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TMCC2O75069 709 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 ZNF10P21506 573 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 TARBP2Q15633 366 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 EARS2Q5JPH6 523 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 GALNT7Q86SF2 657 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 HTR3CQ8WXA8 447 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 KAT5Q92993 513 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 PPP1R16AQ96I34 528 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 FNDC11Q9BVV2 318 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 MBD2Q9UBB5 411 aa17.07■□□□□ 0.32
CACNA1A-253ENST00000637927 VIL1P09327 827 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 RBP1P09455 135 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 SLURP2P0DP57 97 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 ITPKAP23677 461 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 MSX2P35548 267 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 CXCR3P49682 368 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 CNDP2Q96KP4 475 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 ZSCAN5AQ9BUG6 496 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 TMBIM4Q9HC24 238 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 CCDC177Q9NQR7 707 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 XPR1Q9UBH6 696 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 AVILO75366 819 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 LGR5O75473 907 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 MMP13P45452 471 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 ENPEPQ07075 957 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 SLC4A11Q8NBS3 891 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 GMCL1P1Q8NEA9 526 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 MTFR1LQ9H019 292 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 DNPEPQ9ULA0 475 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 PMF1-BGLAPU3KQ54 211 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 SLC33A1O00400 549 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 TPP1O14773 563 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 PEX14O75381 377 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 MED26O95402 600 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 PRKCHP24723 683 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 PSMB4P28070 264 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 ZC3H12AQ5D1E8 599 aaKnown RBP17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 GRTP1Q5TC63 336 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 SLC27A1Q6PCB7 646 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 RASGEF1AQ8N9B8 481 aa17.06■□□□□ 0.32
CACNA1A-253ENST00000637927 ACTL9Q8TC94 416 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms