RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 HRO43593 1189 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 LILRB5O75023 590 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 RPP40O75818 363 aaKnown RBP16.1■□□□□ 0.17
CLN6-216ENST00000636876 SEMA4FO95754 770 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 NDST3O95803 873 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 KRT14P02533 472 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 BCKDHBP21953 392 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 CNR2P34972 360 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 PTGIRP43119 386 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 EPHB1P54762 984 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 C2orf54Q08AI8 447 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 SRSF5Q13243 272 aaKnown RBP16.1■□□□□ 0.17
CLN6-216ENST00000636876 LRRC73Q5JTD7 316 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 KDELC2Q7Z4H8 507 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 LPCAT1Q8NF37 534 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 IPMKQ8NFU5 416 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 IFT43Q96FT9 208 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 MRGPRX2Q96LB1 330 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 KRT12Q99456 494 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 KDM4CQ9H3R0 1056 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 ETNK1Q9HBU6 452 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 RAB6BQ9NRW1 208 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 PPIL1Q9Y3C6 166 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 FADS3Q9Y5Q0 445 aa16.1■□□□□ 0.17
CLN6-216ENST00000636876 WDR87Q6ZQQ6 2873 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 FANCMQ8IYD8 2048 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 ABCA7Q8IZY2 2146 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 CFAP54Q96N23 3096 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 LOC285095A0A1B0GVY8 99 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 GOLGA6CA6NDK9 693 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 GOLGA6BA6NDN3 693 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 LRRC72A6NJI9 287 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 PSMD3O43242 534 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 NDUFS2O75306 463 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 EPOP01588 193 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 PRKCGP05129 697 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 GOLGA6DP0CG33 693 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 ITIH2P19823 946 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 ELP6Q0PNE2 266 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 SEMA5AQ13591 1074 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 TRIP13Q15645 432 aaPredicted RBP16.09■□□□□ 0.17
CLN6-216ENST00000636876 KCTD19Q17RG1 926 aaPredicted RBP16.09■□□□□ 0.17
CLN6-216ENST00000636876 KCTD11Q693B1 232 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 ERAP2Q6P179 960 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 C11orf74Q86VG3 221 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 OR2T34Q8NGX1 318 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 FICDQ9BVA6 458 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 GPR174Q9BXC1 333 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 FSD1LQ9BXM9 530 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 ADGRE3Q9BY15 652 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 PREBQ9HCU5 417 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 GOLGA6AQ9NYA3 693 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 ITM2BQ9Y287 266 aa16.09■□□□□ 0.17
CLN6-216ENST00000636876 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP16.08■□□□□ 0.16
CLN6-216ENST00000636876 A0A0J9YYE9 177 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 RIOK3O14730 519 aaKnown RBP16.08■□□□□ 0.16
CLN6-216ENST00000636876 MAP3K13O43283 966 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 AP2A1O95782 977 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 TRBC1P01850 177 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 CTPS1P17812 591 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 NFKBIAP25963 317 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 ADRA1AP35348 466 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 MMP12P39900 470 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 TNNT3P45378 269 aaPredicted RBP16.08■□□□□ 0.16
CLN6-216ENST00000636876 GRIA4P48058 902 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 VPS41P49754 854 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 DR1Q01658 176 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 GPS1Q13098 491 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 PTK6Q13882 451 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 DHX34Q14147 1143 aaKnown RBP16.08■□□□□ 0.16
CLN6-216ENST00000636876 GALNT3Q14435 633 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 PPP1R7Q15435 360 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 QPCTQ16769 361 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 SYDE1Q6ZW31 735 aaPredicted RBP16.08■□□□□ 0.16
CLN6-216ENST00000636876 USP45Q70EL2 814 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 CEP68Q76N32 757 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 NDUFAF2Q8N183 169 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 PDCD7Q8N8D1 485 aaKnown RBP16.08■□□□□ 0.16
CLN6-216ENST00000636876 MNS1Q8NEH6 495 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 LRRC45Q96CN5 670 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 RMDN1Q96DB5 314 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 SCRN2Q96FV2 425 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 MCCC1Q96RQ3 725 aaPredicted RBP16.08■□□□□ 0.16
CLN6-216ENST00000636876 PCED1AQ9H1Q7 454 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 LRRC40Q9H9A6 602 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 B4GALT6Q9UBX8 382 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 GGT7Q9UJ14 662 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 SPAG17Q6Q759 2223 aa16.08■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3DA0A087WVF3 549 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3IA0A087WXS9 549 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3EA0A087X179 549 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3KA0A087X1G2 549 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3FA6NER0 549 aaPredicted RBP16.07■□□□□ 0.16
CLN6-216ENST00000636876 PRR23AA6NEV1 266 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 CAPN8A6NHC0 703 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 FAM47DPA6NHR8 397 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 ERI2A8K979 691 aaKnown RBP16.07■□□□□ 0.16
CLN6-216ENST00000636876 ANKRD66B4E2M5 251 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 C10orf142B7Z368 130 aa16.07■□□□□ 0.16
CLN6-216ENST00000636876 TBC1D3LB9A6J9 549 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms