RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 SMG7Q92540 1137 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 URADA6NGE7 173 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 OR2AG2A6NM03 316 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 AKAP8O43823 692 aaKnown RBP17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 ALG1LQ6GMV1 187 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CHST9Q7L1S5 443 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 PYDC1Q8WXC3 89 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 CYP2S1Q96SQ9 504 aa17.93■□□□□ 0.46
CACNA1A-227ENST00000636549 NELFEP18615 380 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 NOS2P35228 1153 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 ZNF132P52740 706 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 ACTL9Q8TC94 416 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 ABCB9Q9NP78 766 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 WWP2O00308 870 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 MC4RP32245 332 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 FAAP100Q0VG06 881 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 KRR1Q13601 381 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 SPANXN3Q5MJ09 141 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 C1orf94Q6P1W5 598 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 SMARCD3Q6STE5 483 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 CFAP206Q8IYR0 622 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 RDH11Q8TC12 318 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 CAPSLQ8WWF8 208 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 RORBQ92753 470 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 EXOSC8Q96B26 276 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 NKIRAS2Q9NYR9 191 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 PIK3CDO00329 1044 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 FGBP02675 491 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 MYBL2P10244 700 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 EIF2S3P41091 472 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 RCAN1P53805 252 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 DLG4P78352 724 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 TROAPQ12815 778 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 DLG1Q12959 904 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 TCP10LQ8TDR4 215 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 POLR3HQ9Y535 204 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 AP4S1Q9Y587 144 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 NOX1Q9Y5S8 564 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 A0A1W2PQH9 124 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 CCDC153Q494R4 210 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 RFWD3Q6PCD5 774 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 ABHD5Q8WTS1 349 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 DUS2Q9NX74 493 aaKnown RBP17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC9A3R1O14745 358 aaPredicted RBP17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 NEK3P51956 506 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 OR6Y1Q8NGX8 325 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 NOD2Q9HC29 1040 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 DNPEPQ9ULA0 475 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 TBC1D24Q9ULP9 559 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 MAP4K5Q9Y4K4 846 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 MROH7Q68CQ1 1323 aa17.92■□□□□ 0.46
CACNA1A-227ENST00000636549 LRRC72A6NJI9 287 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 YAP1P46937 504 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 EIF1AXP47813 144 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 MAPK7Q13164 816 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 TCEAL6Q6IPX3 200 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 SUN3Q8TAQ9 357 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 CPNE1Q99829 537 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 SEMA3CQ99985 751 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 C2orf49Q9BVC5 232 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 IRF6O14896 467 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 GNRH1P01148 92 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 CATP04040 527 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 ZNF571Q7Z3V5 609 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 AMIGO1Q86WK6 493 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 TEX47Q8TBZ9 253 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 DCLK3Q9C098 648 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 KPNA4O00629 521 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 GNPDA1P46926 289 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 RNF144AP50876 292 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 SV2AQ7L0J3 742 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 BEND5Q7L4P6 421 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 UBE2J2Q8N2K1 259 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 ZMIZ2Q8NF64 920 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 LINGO1Q96FE5 620 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 NAALADL1Q9UQQ1 740 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 RPL17P18621 184 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 ADGRA1Q86SQ6 560 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 RMND5BQ96G75 393 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 TRMT13Q9NUP7 481 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 XKRYO14609 159 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 C9P02748 559 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 CCND1P24385 295 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 ARCN1P48444 511 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 USP46P62068 366 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 MRPS22P82650 360 aaKnown RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 SLC13A2Q13183 592 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 FAM9CQ8IZT9 166 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 PTGR2Q8N8N7 351 aaPredicted RBP17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 PLEKHA1Q9HB21 404 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 CLN6Q9NWW5 311 aa17.91■□□□□ 0.46
CACNA1A-227ENST00000636549 A8MUI8 341 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 NUDT17P0C025 328 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ACADSP16219 412 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ZNF8P17098 575 aaPredicted RBP17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 MAN2A2P49641 1150 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 STXBP5Q5T5C0 1151 aa17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 INTS5Q6P9B9 1019 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 TRMT2AQ8IZ69 625 aaKnown RBP17.9■□□□□ 0.46
CACNA1A-227ENST00000636549 ACTRT2Q8TDY3 377 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms