RNA–Protein interactions for RNA: ENST00000634433.1

BRCA1-230, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 2,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-230ENST00000634433 MRGPRX2Q96LB1 330 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 MYRFLQ96LU7 910 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 RMDN2Q96LZ7 410 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 C12orf65Q9H3J6 166 aaKnown RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 SAR1AQ9NR31 198 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 SNX15Q9NRS6 342 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 SPG21Q9NZD8 308 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 HCSTQ9UBK5 93 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 TLK1Q9UKI8 766 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 TBX21Q9UL17 535 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 GPR52Q9Y2T5 361 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PSAT1Q9Y617 370 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CENPFP49454 3210 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 SHROOM3Q8TF72 1996 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 ZNF840PA6NDX5 716 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 B9A039 149 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 SOX1O00570 391 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PLIN3O60664 434 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PRAMEF11O60813 436 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 H2AFYO75367 372 aaKnown RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CLDN11O75508 207 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PAPSS2O95340 614 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PEX11BO96011 259 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CLTBP09497 229 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 COL6A2P12110 1019 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 ATF6P18850 670 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CES1P23141 567 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 NMBRP28336 390 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 SERPINH1P50454 418 aaKnown RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 BTG3Q14201 252 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 LBRQ14739 615 aaKnown RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CHI3L2Q15782 390 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PLA2G4EQ3MJ16 856 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 N4BP2L1Q5TBK1 243 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 KIAA0930Q6ICG6 404 aaPredicted RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 FSTL4Q6MZW2 842 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 SHQ1Q6PI26 577 aaKnown RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 KDELC1Q6UW63 502 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 KIAA0408Q6ZU52 694 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CNTN4Q8IWV2 1026 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CMTR2Q8IYT2 770 aaKnown RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 C7orf61Q8IZ16 206 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 TDHQ8IZJ6 230 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 LGI2Q8N0V4 545 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 AFAP1L2Q8N4X5 818 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PTPRN2Q92932 1015 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CLSTN3Q9BQT9 956 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 POLR1EQ9GZS1 481 aaKnown RBP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 RHOJQ9H4E5 214 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 CYP4F11Q9HBI6 524 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.22□□□□□ -1.25
BRCA1-230ENST00000634433 KCNK4Q9NYG8 393 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 PPT2Q9UMR5 302 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 SSX2IPQ9Y2D8 614 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 ATP11BQ9Y2G3 1177 aa7.22□□□□□ -1.25
BRCA1-230ENST00000634433 TET1Q8NFU7 2136 aa7.21□□□□□ -1.25
BRCA1-230ENST00000634433 A0A0B4J203 849 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 J3KR12 359 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 SMAD7O15105 426 aaKnown RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ADAM12O43184 909 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 SIN3BO75182 1162 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 LATS1O95835 1130 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 EPOP01588 193 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 URODP06132 367 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 PRKAA2P54646 552 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 EPHB3P54753 998 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ZBTB16Q05516 673 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 PLD1Q13393 1074 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ZNF235Q14590 738 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 RFTN1Q14699 578 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 POU6F1Q14863 301 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 SLC14A2Q15849 920 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 FNDC1Q4ZHG4 1894 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 FASTKD1Q53R41 847 aaKnown RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 TAF1BQ53T94 588 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 FIP1L1Q6UN15 594 aaKnown RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 DDX53Q86TM3 631 aaKnown RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ITIH5Q86UX2 942 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 HERC6Q8IVU3 1022 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 SLC39A11Q8N1S5 342 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 PPP4R1Q8TF05 950 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 PSMG2Q969U7 264 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ZNF689Q96CS4 500 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 KLHL29Q96CT2 875 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 FAM210AQ96ND0 272 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 RAB3IPQ96QF0 476 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 AGAP2Q99490 1192 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 GPR22Q99680 433 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 MYLK2Q9H1R3 596 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ATP13A1Q9HD20 1204 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 SLC40A1Q9NP59 571 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ZFP69BQ9UJL9 534 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 TANC1Q9C0D5 1861 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 TMEM265A0A087WTH1 108 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 A0A096LPK6 155 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.21□□□□□ -1.26
BRCA1-230ENST00000634433 A0A0G2JND7 137 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 UNC5CO95185 931 aa7.21□□□□□ -1.26
BRCA1-230ENST00000634433 PROCP04070 461 aa7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms