RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 ECT2Q9H8V3 914 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 UNKLQ9H9P5 680 aaKnown RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 CNNM1Q9NRU3 951 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 SLC39A1Q9NY26 324 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 BARHL2Q9NY43 387 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 WWOXQ9NZC7 414 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 NCDNQ9UBB6 729 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 GULP1Q9UBP9 304 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 AP4B1Q9Y6B7 739 aa4.93□□□□□ -1.62
SDCBP-213ENST00000630925 TROQ12816 1431 aaPredicted RBP4.93□□□□□ -1.62
SDCBP-213ENST00000630925 TMEM2Q9UHN6 1383 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 A0A1W2PQM1 296 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 OOEPA6NGQ2 149 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 OR6C75A6NL08 312 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CCDC188H7C350 402 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 EIF3DO15371 548 aaKnown RBP eCLIP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 TULP3O75386 442 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF189O75820 626 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 ZIC2O95409 532 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 RPLP2P05387 115 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CRYGCP07315 174 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 PABPC4LP0CB38 370 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 FUT1P19526 365 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 SERPINA4P29622 427 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CDC25CP30307 473 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 EPHB3P54753 998 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 MGAT2Q10469 447 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 SRSF5Q13243 272 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 PDCLQ13371 301 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 EPC2Q52LR7 807 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 HABP4Q5JVS0 413 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 TBC1D9BQ66K14 1250 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 KIAA1161Q6NSJ0 714 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 TRIM65Q6PJ69 517 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 PARS2Q7L3T8 475 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CUZD1Q86UP6 607 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 PHYKPLQ8IUZ5 450 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 DHX40Q8IX18 779 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 LRRC34Q8IZ02 419 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 MINDY1Q8N5J2 469 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CAMKVQ8NCB2 501 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 OR7G3Q8NG95 312 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 OR8J1Q8NGP2 316 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 OR56A3Q8NH54 315 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 GRAPLQ8TC17 118 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 ELP5Q8TE02 316 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 OR1E3Q8WZA6 343 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 RPGRIP1Q96KN7 1286 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 TSG101Q99816 390 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CCT7Q99832 543 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 OSBPL8Q9BZF1 889 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 RTN4RQ9BZR6 473 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 NELFAQ9H3P2 528 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 METTL7AQ9H8H3 244 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 TREM1Q9NP99 234 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 STX18Q9P2W9 335 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 DBF4Q9UBU7 674 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 TRMT6Q9UJA5 497 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 FBXW2Q9UKT8 454 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 PPIEQ9UNP9 301 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 NUMBLQ9Y6R0 609 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 MST1RQ04912 1400 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 MARF1Q9Y4F3 1742 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 MYOM2P54296 1465 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 LAMC1P11047 1609 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CASZ1Q86V15 1759 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 A0A075B6Q4 140 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 IQANK1A0A1B0GTG1 560 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 A0A1W2PNR3 127 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 TCRBV21S2A2A0A5A6 115 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 HTR3EA5X5Y0 456 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 SAC3D1A6NKF1 404 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 LRRC53A6NM62 1247 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CDRT15L2A8MXV6 281 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 KDM4EB2RXH2 506 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 KCNJ18B7U540 433 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 HRKO00198 91 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 PEX12O00623 359 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 SEPT4O43236 478 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 LRRTM2O43300 516 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 DNAJB6O75190 326 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 SEC14L2O76054 403 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 ERLIN2O94905 339 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 ABHD16AO95870 558 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 LGI1O95970 557 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 CELA3BP08861 270 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 ACAA1P09110 424 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 ATF2P15336 505 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 RPL13P26373 211 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 IL1R2P27930 398 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 MSX2P35548 267 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 XIAPP98170 497 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 ZNF200P98182 395 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 SNTB2Q13425 540 aaKnown RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 TSTA3Q13630 321 aaPredicted RBP4.92□□□□□ -1.62
SDCBP-213ENST00000630925 KCNJ12Q14500 433 aa4.92□□□□□ -1.62
SDCBP-213ENST00000630925 LARS2Q15031 903 aaKnown RBP4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms