RNA–Protein interactions for RNA: ENST00000626828.1

UBE3D-208, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5 BASIC

Gene UBE3D, Length 114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-208ENST00000626828 NSMCE3Q96MG7 304 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 POLR1EQ9GZS1 481 aaKnown RBP16.87■□□□□ 0.29
UBE3D-208ENST00000626828 CA5BQ9Y2D0 317 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 ATP8A1Q9Y2Q0 1164 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 PCDHB9Q9Y5E1 797 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 PCDHA3Q9Y5H8 950 aa16.87■□□□□ 0.29
UBE3D-208ENST00000626828 PPP1R12AO14974 1030 aaPredicted RBP16.86■□□□□ 0.29
UBE3D-208ENST00000626828 YKT6O15498 198 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 CST8O60676 142 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 JCHAINP01591 159 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 CCT8P50990 548 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 CLDN2P57739 230 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 COPS2P61201 443 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 PSAPL1Q6NUJ1 521 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 Q6ZSR6 202 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 ZSWIM9Q86XI8 627 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 SPATS2Q86XZ4 545 aaKnown RBP16.86■□□□□ 0.29
UBE3D-208ENST00000626828 DENND6BQ8NEG7 585 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 SETD7Q8WTS6 366 aaKnown RBP16.86■□□□□ 0.29
UBE3D-208ENST00000626828 CENPTQ96BT3 561 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 LGMNQ99538 433 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 KLF6Q99612 283 aaPredicted RBP16.86■□□□□ 0.29
UBE3D-208ENST00000626828 MYOCQ99972 504 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 SEMA3CQ99985 751 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 WRAP53Q9BUR4 548 aaKnown RBP16.86■□□□□ 0.29
UBE3D-208ENST00000626828 FZD3Q9NPG1 666 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 PHTF1Q9UMS5 762 aa16.86■□□□□ 0.29
UBE3D-208ENST00000626828 ARID1BQ8NFD5 2236 aaPredicted RBP16.85■□□□□ 0.29
UBE3D-208ENST00000626828 CCDC66A2RUB6 948 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 A6NNZ2 444 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 RAD51BO15315 384 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 FLRT2O43155 660 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 KRT10P13645 584 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 KCNA4P22459 653 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 CTNNA1P35221 906 aaKnown RBP16.85■□□□□ 0.29
UBE3D-208ENST00000626828 CETN2P41208 172 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 DYNLT1P63172 113 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 AP1B1Q10567 949 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 ARMC12Q5T9G4 340 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 KAZNQ674X7 775 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 ALG1LQ6GMV1 187 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 NPNTQ6UXI9 565 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 GCNT7Q6ZNI0 430 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 CCDC50Q8IVM0 306 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 NAXDQ8IW45 347 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 SYCE1Q8N0S2 351 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 NDUFAF2Q8N183 169 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 RNF10Q8N5U6 811 aaKnown RBP16.85■□□□□ 0.29
UBE3D-208ENST00000626828 CCDC112Q8NEF3 446 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 RHBDD1Q8TEB9 315 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 PDCD6IPQ8WUM4 868 aaKnown RBP16.85■□□□□ 0.29
UBE3D-208ENST00000626828 KRT35Q92764 455 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 IL12RB2Q99665 862 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 DESI2Q9BSY9 194 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 AMFRQ9UKV5 643 aa16.85■□□□□ 0.29
UBE3D-208ENST00000626828 POM121BA6NF01 834 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 TOR1BO14657 336 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 GIPC1O14908 333 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 ARHGAP6O43182 974 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 LZTS3O60299 673 aaPredicted RBP16.84■□□□□ 0.29
UBE3D-208ENST00000626828 TGM2P21980 687 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 CTNNA2P26232 953 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 MMP12P39900 470 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 RABIFP47224 123 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 LIG3P49916 1009 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 RWDD2BP57060 319 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 IFI35P80217 286 aaPredicted RBP16.84■□□□□ 0.29
UBE3D-208ENST00000626828 AGERQ15109 404 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 PPP2R5EQ16537 467 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 N4BP2L1Q5TBK1 243 aaPredicted RBP16.84■□□□□ 0.29
UBE3D-208ENST00000626828 KYAT3Q6YP21 454 aaKnown RBP16.84■□□□□ 0.29
UBE3D-208ENST00000626828 LRRC57Q8N9N7 239 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 OR13H1Q8NG92 308 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 LRRN4Q8WUT4 740 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 UBE2Q2Q8WVN8 375 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 P3H4Q92791 437 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 IFT43Q96FT9 208 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 OLFM3Q96PB7 478 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 EFR3BQ9Y2G0 817 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 PPIL1Q9Y3C6 166 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 RAI2Q9Y5P3 530 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 KNTC1P50748 2209 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 GOLGA4Q13439 2230 aaKnown RBP16.84■□□□□ 0.29
UBE3D-208ENST00000626828 NCOR2Q9Y618 2525 aa16.84■□□□□ 0.29
UBE3D-208ENST00000626828 hCG_1818297A0A087WSY0 165 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 MACROD2A1Z1Q3 448 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 GRID2IPA4D2P6 1211 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 KCNK1O00180 336 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 PGLSO95336 258 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 CPP00450 1065 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 PRKCGP05129 697 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 ITGAVP06756 1048 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 CA4P22748 312 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 MARCKSL1P49006 195 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 PEX5P50542 639 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 YPEL5P62699 121 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 TP53BP1Q12888 1972 aaPredicted RBP16.83■□□□□ 0.28
UBE3D-208ENST00000626828 TRAF2Q12933 501 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 LRRC14Q15048 493 aa16.83■□□□□ 0.28
UBE3D-208ENST00000626828 LLGL1Q15334 1064 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms