RNA–Protein interactions for RNA: ENST00000621967.4

FAM3A-222, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 1,901 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-222ENST00000621967 EPHB1P54762 984 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 CUL3Q13618 768 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 HNRNPDQ14103 355 aaKnown RBP17.6■□□□□ 0.41
FAM3A-222ENST00000621967 GRIN2CQ14957 1233 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 DDR2Q16832 855 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 PCID2Q5JVF3 399 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 PKN3Q6P5Z2 889 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 RNF111Q6ZNA4 994 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 TCEAL8Q8IYN2 117 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 KREMEN2Q8NCW0 462 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 STYXQ8WUJ0 223 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 IL12RB2Q99665 862 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 TRIM62Q9BVG3 475 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 SHCBP1LQ9BZQ2 653 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 TASP1Q9H6P5 420 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 ZDHHC7Q9NXF8 308 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 CPSF2Q9P2I0 782 aaKnown RBP17.6■□□□□ 0.41
FAM3A-222ENST00000621967 TLK1Q9UKI8 766 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 POMPQ9Y244 141 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 ASB3Q9Y575 518 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 PLXNA3P51805 1871 aa17.6■□□□□ 0.41
FAM3A-222ENST00000621967 GOLGA8TH3BQL2 631 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 HDAC3O15379 428 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 PDE5AO76074 875 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 BAG2O95816 211 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 CHRNGP07510 517 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 SRGAP2BP0DMP2 458 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 MPSTP25325 297 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 ALDH1A3P47895 512 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 NRIP1P48552 1158 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 POLD2P49005 469 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 GPR15P49685 360 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 MTTPP55157 894 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 TBL3Q12788 808 aaKnown RBP17.59■□□□□ 0.41
FAM3A-222ENST00000621967 UGP2Q16851 508 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 ARTNQ5T4W7 220 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 LILRA6Q6PI73 481 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 CCDC149Q6ZUS6 474 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 CENPLQ8N0S6 344 aaPredicted RBP17.59■□□□□ 0.41
FAM3A-222ENST00000621967 FBXW8Q8N3Y1 598 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 ZNF419Q96HQ0 510 aaPredicted RBP17.59■□□□□ 0.41
FAM3A-222ENST00000621967 C8orf48Q96LL4 319 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 TBL1YQ9BQ87 522 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 NSUN3Q9H649 340 aaKnown RBP17.59■□□□□ 0.41
FAM3A-222ENST00000621967 YIPF1Q9Y548 306 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 LOC100653049A0A140TA62 436 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 SLC22A2O15244 555 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 IRAK2O43187 625 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 KRT34O76011 436 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 ANXA9O76027 345 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 SORBS2O94875 1100 aaKnown RBP17.59■□□□□ 0.41
FAM3A-222ENST00000621967 HTR7P34969 479 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 RPL14P50914 215 aaKnown RBP17.59■□□□□ 0.41
FAM3A-222ENST00000621967 SLC12A1Q13621 1099 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 MANEALQ5VSG8 457 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 SDHAF4Q5VUM1 108 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 DENND5AQ6IQ26 1287 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 ELMSAN1Q6PJG2 1045 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 ARHGAP36Q6ZRI8 547 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 RAPH1Q70E73 1250 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 SPATA22Q8NHS9 363 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 PYDC1Q8WXC3 89 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 ZNF385DQ9H6B1 395 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 MRM3Q9HC36 420 aaKnown RBP17.59■□□□□ 0.41
FAM3A-222ENST00000621967 DPP7Q9UHL4 492 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 INSL5Q9Y5Q6 135 aa17.59■□□□□ 0.41
FAM3A-222ENST00000621967 PHGDHO43175 533 aaKnown RBP17.58■□□□□ 0.4
FAM3A-222ENST00000621967 C1RP00736 705 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 AHSGP02765 367 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 C8AP07357 584 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 EPCAMP16422 314 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 GRIA4P48058 902 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 ARCN1P48444 511 aaKnown RBP17.58■□□□□ 0.4
FAM3A-222ENST00000621967 PRKAA1Q13131 559 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 PLD1Q13393 1074 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 PEX6Q13608 980 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 USP10Q14694 798 aaKnown RBP17.58■□□□□ 0.4
FAM3A-222ENST00000621967 DUSP6Q16828 381 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 BRMS1LQ5PSV4 323 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 CPSF7Q8N684 471 aaKnown RBP17.58■□□□□ 0.4
FAM3A-222ENST00000621967 USP33Q8TEY7 942 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 PTCD2Q8WV60 388 aaKnown RBP17.58■□□□□ 0.4
FAM3A-222ENST00000621967 RNF34Q969K3 372 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 TSNARE1Q96NA8 513 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 LENG8Q96PV6 779 aaPredicted RBP17.58■□□□□ 0.4
FAM3A-222ENST00000621967 HAPLN3Q96S86 360 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 CDCA3Q99618 268 aaPredicted RBP17.58■□□□□ 0.4
FAM3A-222ENST00000621967 GLOD4Q9HC38 313 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 LMCD1Q9NZU5 365 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 HCFC2Q9Y5Z7 792 aa17.58■□□□□ 0.4
FAM3A-222ENST00000621967 SZT2Q5T011 3432 aa17.57■□□□□ 0.4
FAM3A-222ENST00000621967 FGF10O15520 208 aaPredicted RBP17.57■□□□□ 0.4
FAM3A-222ENST00000621967 GRID2O43424 1007 aa17.57■□□□□ 0.4
FAM3A-222ENST00000621967 MAFKO60675 156 aa17.57■□□□□ 0.4
FAM3A-222ENST00000621967 LRG1P02750 347 aa17.57■□□□□ 0.4
FAM3A-222ENST00000621967 ATF6P18850 670 aa17.57■□□□□ 0.4
FAM3A-222ENST00000621967 ARNTP27540 789 aa17.57■□□□□ 0.4
FAM3A-222ENST00000621967 ADRA1AP35348 466 aa17.57■□□□□ 0.4
FAM3A-222ENST00000621967 SLC5A3P53794 718 aa17.57■□□□□ 0.4
FAM3A-222ENST00000621967 NSUN2Q08J23 767 aaKnown RBP eCLIP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms