RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 ARL10Q8N8L6 244 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 EXD3Q8N9H8 876 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 PCDH19Q8TAB3 1148 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 UBXN4Q92575 508 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 CENPTQ96BT3 561 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 SGF29Q96ES7 293 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 PGAP3Q96FM1 320 aaPredicted RBP7.93□□□□□ -1.14
CLK1-215ENST00000621181 TBATAQ96M53 351 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 ZYG11BQ9C0D3 744 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 PLCB1Q9NQ66 1216 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 TMPRSS4Q9NRS4 437 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 SEPT10Q9P0V9 454 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 APEX2Q9UBZ4 518 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 PNMA8BQ9ULN7 279 aaPredicted RBP7.93□□□□□ -1.14
CLK1-215ENST00000621181 PCDHGA7Q9Y5G6 932 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 ACTL7AQ9Y615 435 aa7.93□□□□□ -1.14
CLK1-215ENST00000621181 D6RAR5 112 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TMX2-CTNND1H3BSU7 103 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 ZMPSTE24O75844 475 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TM7SF2O76062 418 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 FGFR1OPO95684 399 aaKnown RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 ITGB2P05107 769 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TPM1P09493 284 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 ALPIP09923 528 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 CCDC175P0C221 793 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 FAM87AP0C7U9 286 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 CTSEP14091 401 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 HGFP14210 728 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 SLC9A1P19634 815 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 UGT1A5P35504 534 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 IGFALSP35858 605 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 ETFBP38117 255 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 INHBCP55103 352 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 GEMIN4P57678 1058 aaKnown RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 YPEL5P62699 121 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 NFKB2Q00653 900 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 APBA1Q02410 837 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 ELOCQ15369 112 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 LINC00303Q3SY05 128 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 SLC25A52Q3SY17 297 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 LRRC73Q5JTD7 316 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 FAM102AQ5T9C2 384 aaPredicted RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 FOXR2Q6PJQ5 311 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 XKR5Q6UX68 686 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 SDR16C5Q8N3Y7 309 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 FSTL5Q8N475 847 aaPredicted RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 ZSCAN1Q8NBB4 408 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 KYQ8NBH2 561 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 CXorf40AQ8TE69 158 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 ASB12Q8WXK4 309 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 SHC3Q92529 594 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 NT5C3BQ969T7 300 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 CCDC74AQ96AQ1 378 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 ISG20Q96AZ6 181 aaKnown RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 HAPLN3Q96S86 360 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TBCBQ99426 244 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 CPEB1Q9BZB8 566 aaKnown RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 CLPBQ9H078 707 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TMEM51Q9NW97 253 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 PISDQ9UG56 409 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 HPCAL4Q9UM19 191 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 FAM170AA1A519 330 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 AGRPO00253 132 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TOR1BO14657 336 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 MMP20O60882 483 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 RPLP0P05388 317 aaKnown RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 CELA2BP08218 269 aaPredicted RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 LIPCP11150 499 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 SFTPCP11686 197 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 HTR1BP28222 390 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 CASP14P31944 242 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 HK3P52790 923 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 SNRPD1P62314 119 aaKnown RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 SRSF6Q13247 344 aaKnown RBP7.92□□□□□ -1.14
CLK1-215ENST00000621181 EXOC3L4Q17RC7 722 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TCP11X2Q5H9J9 407 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 LVRNQ6Q4G3 990 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 GBP6Q6ZN66 633 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 RD3Q7Z3Z2 195 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 SLC47A2Q86VL8 602 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 FAM131BQ86XD5 332 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 HID1Q8IV36 788 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 CNGA4Q8IV77 575 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TMEM35BQ8NCS4 154 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 OR2AP1Q8NGE2 309 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 KLHL32Q96NJ5 620 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TMEM74Q96NL1 305 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 EPAS1Q99814 870 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 OSBPL1AQ9BXW6 950 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 STARD5Q9NSY2 213 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 ZNF212Q9UDV6 495 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 RABGEF1Q9UJ41 708 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 ACSL6Q9UKU0 697 aa7.92□□□□□ -1.14
CLK1-215ENST00000621181 TERTO14746 1132 aaKnown RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 AREL1O15033 823 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 NVLO15381 856 aaKnown RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 SASH3O75995 380 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 POP4O95707 220 aaKnown RBP7.91□□□□□ -1.14
CLK1-215ENST00000621181 CCKBRP32239 447 aa7.91□□□□□ -1.14
CLK1-215ENST00000621181 ACVRL1P37023 503 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms