RNA–Protein interactions for RNA: ENST00000620992.4

PTPDC1-204, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPDC1, Length 4,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-204ENST00000620992 SNX5Q9Y5X3 404 aa8.34□□□□□ -1.08
PTPDC1-204ENST00000620992 RTTNQ86VV8 2226 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 EME2A4GXA9 379 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 H0Y858 1186 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 NR5A2O00482 541 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 KLF11O14901 512 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CABYRO75952 493 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF682O95780 498 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CRHR1P34998 444 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 FDFT1P37268 417 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CXCR3P49682 368 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CTBP1Q13363 440 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 RAET1GQ6H3X3 334 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC30A9Q6PML9 568 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 LRRC8DQ7L1W4 858 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CCDC185Q8N715 623 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 TRPC4APQ8TEL6 797 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 NACC2Q96BF6 587 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 LRRC39Q96DD0 335 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 OTUB1Q96FW1 271 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 RNF39Q9H2S5 420 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 PNPLA8Q9NP80 782 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 PNPOQ9NVS9 261 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 SOX13Q9UN79 622 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CDYLQ9Y232 598 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 GPSM3Q9Y4H4 160 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 PCDHA11Q9Y5I1 949 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 FER1L6Q2WGJ9 1857 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 MYO10Q9HD67 2058 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC31A1O15431 190 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 TM7SF2O76062 418 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 PROCP04070 461 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 NFKB1P19838 968 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 EDNRBP24530 442 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 GRK3P35626 688 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 TUSC3Q13454 348 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 RALGPS1Q5JS13 557 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC24A5Q71RS6 500 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CTU1Q7Z7A3 348 aaKnown RBP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 LDB1Q86U70 411 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 ARL14EPQ8N8R7 260 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 METTL6Q8TCB7 284 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 DPEP3Q9H4B8 488 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 ARHGEF4Q9NR80 690 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 C2CD2Q9Y426 696 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 A0A096LPK6 155 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 UGT2B4P06133 528 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 SERPINA6P08185 405 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 PFKMP08237 780 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CPA3P15088 417 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 NOS2P35228 1153 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 SEC13P55735 322 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 DSG1Q02413 1049 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 ABRQ12979 859 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 OLIG2Q13516 323 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 HSF5Q4G112 596 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 AGKQ53H12 422 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 TCHHL1Q5QJ38 904 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 SLC9A4Q6AI14 798 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 GDF6Q6KF10 455 aaPredicted RBP8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CMC1Q7Z7K0 106 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 C10orf107Q8IVU9 208 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 KBTBD2Q8IY47 623 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 PRSS58Q8IYP2 241 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 TNS4Q8IZW8 715 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 KCNN1Q92952 543 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 CSPG4P5Q96PW8 444 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 TNKS2Q9H2K2 1166 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 MIEF1Q9NQG6 463 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF358Q9NW07 568 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 ARL15Q9NXU5 204 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 PPM1HQ9ULR3 514 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 TRIP11Q15643 1979 aa8.33□□□□□ -1.08
PTPDC1-204ENST00000620992 TRAV19A0A0A6YYK7 116 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 MAGEC1O60732 1142 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 C22orf31O95567 290 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 IGSF6O95976 241 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TYMPP19971 482 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 L1CAMP32004 1257 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 COPAP53621 1224 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 NAGLUP54802 743 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CDH17Q12864 832 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CYP51A1Q16850 503 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CCDC81Q6ZN84 652 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 NET1Q7Z628 596 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 FAM35AQ86V20 835 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 KCNMB4Q86W47 210 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CCNJLQ8IV13 435 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 OR52K2Q8NGK3 314 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 SHKBP1Q8TBC3 707 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 ZNF483Q8TF39 744 aaPredicted RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 RHOBTB2Q9BYZ6 727 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CXCL16Q9H2A7 254 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 CAAP1Q9H8G2 361 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PARVBQ9HBI1 364 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PLAC1Q9HBJ0 212 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 PAPOLBQ9NRJ5 636 aaKnown RBP8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 TMPRSS4Q9NRS4 437 aa8.32□□□□□ -1.08
PTPDC1-204ENST00000620992 GIMAP4Q9NUV9 329 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms