RNA–Protein interactions for RNA: ENST00000617456.1

GPC6-202, Transcript of glypican 6, humanhuman

TSL 3 BASIC

Gene GPC6, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-202ENST00000617456 IRAK1P51617 712 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 CDR2Q01850 454 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 MPP3Q13368 585 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 LAMB3Q13751 1172 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 NR0B2Q15466 257 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 FKBP15Q5T1M5 1219 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 FAAH2Q6GMR7 532 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 XYLT1Q86Y38 959 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 ARL14Q8N4G2 192 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 SH2D3CQ8N5H7 860 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 ATP11CQ8NB49 1132 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 ZNF548Q8NEK5 533 aaPredicted RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 TMIEQ8NEW7 156 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 OR8K1Q8NGG5 319 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 OR52K2Q8NGK3 314 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 B4GALNT2Q8NHY0 566 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 LMX1AQ8TE12 382 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 EPS8L1Q8TE68 723 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 PRR11Q96HE9 360 aaPredicted RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 CCNL2Q96S94 520 aaPredicted RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 SH3GL1Q99961 368 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 ARHGAP9Q9BRR9 750 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 USP29Q9HBJ7 922 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 SAMSN1Q9NSI8 373 aaKnown RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 ANO10Q9NW15 660 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 PPARGC1AQ9UBK2 798 aaKnown RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 IPO11Q9UI26 975 aaKnown RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 MYO6Q9UM54 1294 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 ZFR2Q9UPR6 939 aaKnown RBP8.68□□□□□ -1.02
GPC6-202ENST00000617456 TTLL3Q9Y4R7 772 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 HS3ST4Q9Y661 456 aa8.68□□□□□ -1.02
GPC6-202ENST00000617456 EME2A4GXA9 379 aaPredicted RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 POM121BA6NF01 834 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 CDRT15L2A8MXV6 281 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 H3BM21 787 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 K7ERQ8 282 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 RNF103O00237 685 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 SNAP91O60641 907 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 MBD3O95983 291 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 MT-CO1P00395 513 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 CYP1A1P04798 512 aaPredicted RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 MMP8P22894 467 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 RRM1P23921 792 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 PTPN9P43378 593 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 AIF1P55008 147 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 HDAC4P56524 1084 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 JAM2P57087 298 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 GEMIN4P57678 1058 aaKnown RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 NOMO3P69849 1222 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 CTAG1AP78358 180 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 SKOR1P84550 965 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 APBA1Q02410 837 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 SRSF1Q07955 248 aaKnown RBP eCLIP8.67□□□□□ -1.02
GPC6-202ENST00000617456 NME3Q13232 169 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 SRSF6Q13247 344 aaKnown RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 RAPGEF1Q13905 1077 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 FZD2Q14332 565 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 ARL13BQ3SXY8 428 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 LINC00303Q3SY05 128 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 COLEC12Q5KU26 742 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 PERM1Q5SV97 790 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 FAM102AQ5T9C2 384 aaPredicted RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 RETSATQ6NUM9 610 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 ZCCHC8Q6NZY4 707 aaKnown RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 IGF2-ASQ6U949 168 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 NYAP1Q6ZVC0 841 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 USP53Q70EK8 1073 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 STRADAQ7RTN6 431 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 ARHGAP22Q7Z5H3 698 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 ABI3BPQ7Z7G0 1075 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 JAMLQ86YT9 394 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 LURAP1LQ8IV03 231 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 PASD1Q8IV76 773 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 DRC7Q8IY82 874 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 ZNF683Q8IZ20 524 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 GBP7Q8N8V2 638 aaPredicted RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 DCAF4L2Q8NA75 395 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 CHST14Q8NCH0 376 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 WDR36Q8NI36 951 aaKnown RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 GRIN3AQ8TCU5 1115 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 SREK1Q8WXA9 508 aaKnown RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 EXTL1Q92935 676 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 IFT43Q96FT9 208 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 MRFAP1L1Q96HT8 127 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 MPP4Q96JB8 637 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 BMFQ96LC9 184 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 TSGA10Q9BZW7 698 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 CEP44Q9C0F1 390 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 TKTL2Q9H0I9 626 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 MUC3BQ9H195 1237 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 TNKS2Q9H2K2 1166 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 PIGVQ9NUD9 493 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 LIMA1Q9UHB6 759 aaKnown RBP8.67□□□□□ -1.02
GPC6-202ENST00000617456 KLF15Q9UIH9 416 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 VANGL2Q9ULK5 521 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 PCDHGA8Q9Y5G5 932 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 FHOD1Q9Y613 1164 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 GMEB1Q9Y692 573 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 BOD1L1Q8NFC6 3051 aa8.67□□□□□ -1.02
GPC6-202ENST00000617456 NBASA2RRP1 2371 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms