RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 PNMA8BQ9ULN7 279 aaPredicted RBP19.15■□□□□ 0.66
CDX1-202ENST00000616154 RASA4BC9J798 803 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 FGF10O15520 208 aaPredicted RBP19.14■□□□□ 0.65
CDX1-202ENST00000616154 RASA4O43374 803 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 GCATO75600 419 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 C1QL1O75973 258 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 TIMP2P16035 220 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 PSMA2P25787 234 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 SUOXP51687 545 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 CXADRP78310 365 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 PARP15Q460N3 678 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 PRRT3Q5FWE3 981 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 C6orf132Q5T0Z8 1188 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 SCYL2Q6P3W7 929 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 DNAAF5Q86Y56 855 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 UMODL1-AS1Q8N2C9 162 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 HMCESQ96FZ2 354 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 NCAPGQ9BPX3 1015 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 CPEB1Q9BZB8 566 aaKnown RBP19.14■□□□□ 0.65
CDX1-202ENST00000616154 SLC13A1Q9BZW2 595 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 TRIM7Q9C029 511 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 MRPL47Q9HD33 250 aaKnown RBP19.14■□□□□ 0.65
CDX1-202ENST00000616154 MBNL1Q9NR56 388 aaKnown RBP19.14■□□□□ 0.65
CDX1-202ENST00000616154 THSD1Q9NS62 852 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 IMPACTQ9P2X3 320 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 NENFQ9UMX5 172 aa19.14■□□□□ 0.65
CDX1-202ENST00000616154 LUC7L2Q9Y383 392 aaKnown RBP19.14■□□□□ 0.65
CDX1-202ENST00000616154 ANKRD36A6QL64 1941 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 TCEA3O75764 348 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 ITIH2P19823 946 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 RPIAP49247 311 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 UCNP55089 124 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 ADKP55263 362 aaKnown RBP19.13■□□□□ 0.65
CDX1-202ENST00000616154 SERINC3Q13530 473 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 TMEM52BQ4KMG9 183 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 BROXQ5VW32 411 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 RBM44Q6ZP01 1051 aaKnown RBP19.13■□□□□ 0.65
CDX1-202ENST00000616154 SLC35F3Q8IY50 421 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 NETO2Q8NC67 525 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 HCAR2Q8TDS4 363 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 KCNE4Q8WWG9 221 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 NAT6Q93015 286 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 ZNF653Q96CK0 615 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 NAF1Q96HR8 494 aaKnown RBP19.13■□□□□ 0.65
CDX1-202ENST00000616154 WRAP53Q9BUR4 548 aaKnown RBP19.13■□□□□ 0.65
CDX1-202ENST00000616154 CATSPERBQ9H7T0 1116 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 LHX3Q9UBR4 397 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 SATB2Q9UPW6 733 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 ENTPD2Q9Y5L3 495 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 ATMQ13315 3056 aa19.13■□□□□ 0.65
CDX1-202ENST00000616154 A0A1W2PNU3 283 aaPredicted RBP19.12■□□□□ 0.65
CDX1-202ENST00000616154 TSPAN11A1L157 253 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 MUSKO15146 869 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 INSIG1O15503 277 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 CREB3O43889 395 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 LRCH4O75427 683 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 ANXA6P08133 673 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 PCK1P35558 622 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 EIF4A3P38919 411 aaKnown RBP19.12■□□□□ 0.65
CDX1-202ENST00000616154 ZNF135P52742 658 aaPredicted RBP19.12■□□□□ 0.65
CDX1-202ENST00000616154 TMPRSS3P57727 454 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 ELP6Q0PNE2 266 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 C1orf61Q13536 156 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 IRF4Q15306 451 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 TDRD12Q587J7 1177 aaKnown RBP19.12■□□□□ 0.65
CDX1-202ENST00000616154 C3orf38Q5JPI3 329 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 PERM1Q5SV97 790 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 WDR48Q8TAF3 677 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 ATXN7L3BQ96GX2 97 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 PEBP4Q96S96 227 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 CLPBQ9H078 707 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 DONSONQ9NYP3 566 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 AP4E1Q9UPM8 1137 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 PCDHGA8Q9Y5G5 932 aa19.12■□□□□ 0.65
CDX1-202ENST00000616154 YY2O15391 372 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 TSHRP16473 764 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 XPAP23025 273 aaPredicted RBP19.11■□□□□ 0.65
CDX1-202ENST00000616154 MIPP30301 263 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 PEX5P50542 639 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 PPARDQ03181 441 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 GRM3Q14832 879 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 CYTH1Q15438 398 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 ERMARDQ5T6L9 678 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 FAXCQ5TGI0 409 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 CRTC1Q6UUV9 634 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 FSTL5Q8N475 847 aaPredicted RBP19.11■□□□□ 0.65
CDX1-202ENST00000616154 NIPA2Q8N8Q9 360 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 ANP32BQ92688 251 aaKnown RBP19.11■□□□□ 0.65
CDX1-202ENST00000616154 EXOC2Q96KP1 924 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 SNRNP25Q9BV90 132 aaKnown RBP19.11■□□□□ 0.65
CDX1-202ENST00000616154 DPH1Q9BZG8 443 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 LRRC19Q9H756 370 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 UBA2Q9UBT2 640 aaPredicted RBP19.11■□□□□ 0.65
CDX1-202ENST00000616154 ZNF462Q96JM2 2506 aa19.11■□□□□ 0.65
CDX1-202ENST00000616154 A0A087X0T9 212 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 TMEM110-MUSTN1A8MSY1 372 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 ERVH48-1M5A8F1 160 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 RNF8O76064 485 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 PIGNO95427 931 aa19.1■□□□□ 0.65
CDX1-202ENST00000616154 FAM228BP0C875 321 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms