RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SP100P23497 879 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 RAP1GDS1P52306 607 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 GPR158Q5T848 1215 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 FBXL22Q6P050 247 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 CDYL2Q8N8U2 506 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SEPT8Q92599 483 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRIM15Q9C019 465 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCDC90BQ9GZT6 254 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TLE6Q9H808 572 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 LSM7Q9UK45 103 aaKnown RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 RNF112Q9ULX5 631 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 MYH7BA7E2Y1 1941 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SMIM31A0A1B0GVY4 71 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 KANSL1LA0AUZ9 987 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLOCKO15516 846 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 NDST3O95803 873 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF23P17027 643 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 CKMT2P17540 419 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 PSMA4P25789 261 aaKnown RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 GRIA3P42263 894 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 THOP1P52888 689 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ATN1P54259 1190 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 IL2P60568 153 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TTLL9Q3SXZ7 439 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ATP6AP1LQ52LC2 224 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 LRRC23Q53EV4 343 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 FBXO48Q5FWF7 155 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TBCELQ5QJ74 424 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TTC33Q6PID6 262 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF786Q8N393 782 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR7D4Q8NG98 312 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR4K2Q8NGD2 314 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 RSPH1Q8WYR4 309 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 NSMCE2Q96MF7 247 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 HBEGFQ99075 208 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 PCDHGC4Q9Y5F7 938 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 AK5Q9Y6K8 562 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 PRMT5O14744 637 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 FAM58BPP0C7Q3 252 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ELNP15502 786 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 HSPA13P48723 471 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 IDH3AP50213 366 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 PHEXP78562 749 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 CHRNB3Q05901 458 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SCAPQ12770 1279 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 TSTD2Q5T7W7 516 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLEC4FQ8N1N0 589 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 MAPK15Q8TD08 544 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ARNTL2Q8WYA1 636 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 EMID1Q96A84 441 aaPredicted RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 ESAMQ96AP7 390 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 MOCOSQ96EN8 888 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 DNAJC1Q96KC8 554 aaKnown RBP5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SEPHS2Q99611 448 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 AP4B1Q9Y6B7 739 aa5.67□□□□□ -1.5
SYNCRIP-204ENST00000616122 SYCE1LA8MT33 242 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CNMDO75829 334 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 TYMPP19971 482 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 FASP25445 335 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCNFP41002 786 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 TRIM25Q14258 630 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 LBRQ14739 615 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PCLAFQ15004 111 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 DSELQ8IZU8 1212 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ENDOVQ8N8Q3 282 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 BHLHE22Q8NFJ8 381 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 DDI1Q8WTU0 396 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 PTCD2Q8WV60 388 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CASP10Q92851 521 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 NMRK2Q9NPI5 230 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 OLA1Q9NTK5 396 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 C4BP0C0L5 1744 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 STX16-NPEPL1H3BU86 382 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CLASP2O75122 1294 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SIX3O95343 332 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 FYNP06241 537 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 NNMTP40261 264 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 KPNA1P52294 538 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RPS24P62847 133 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RALGDSQ12967 914 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 GTF2H3Q13889 308 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 STXBP5Q5T5C0 1151 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RANBP10Q6VN20 620 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 NKAPQ8N5F7 415 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SNX31Q8N9S9 440 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 MRPS31Q92665 395 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 B3GALT6Q96L58 329 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CCDC28BQ9BUN5 200 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 RUBCNLQ9H714 662 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 FBRSL1Q9HCM7 1045 aaKnown RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 MKL2Q9ULH7 1088 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ROS1P08922 2347 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 HMX2A2RU54 273 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 OR6C75A6NL08 312 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 AURKAO14965 403 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 DCLK1O15075 740 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ALDH1A1P00352 501 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 ZNF7P17097 686 aaPredicted RBP5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 SREBF2Q12772 1141 aa5.66□□□□□ -1.5
SYNCRIP-204ENST00000616122 CYP51A1Q16850 503 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms