RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 HTR7P34969 479 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 MMP12P39900 470 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 RGRP47804 291 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 LIG3P49916 1009 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 NDST2P52849 883 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 INPP5AQ14642 412 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 NFATC4Q14934 902 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 NCAPHQ15003 741 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 ELOCQ15369 112 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 STX1AQ16623 288 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 CA9Q16790 459 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 ARHGAP40Q5TG30 622 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 ERAP2Q6P179 960 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 FOXR1Q6PIV2 292 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 ENPP7Q6UWV6 458 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 CAMK1DQ8IU85 385 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 ARL10Q8N8L6 244 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 WDR48Q8TAF3 677 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 ZNF641Q96N77 438 aaPredicted RBP20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 APOOQ9BUR5 198 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 DPH1Q9BZG8 443 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 EDEM3Q9BZQ6 932 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 SLC39A8Q9C0K1 460 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 SYNDIG1Q9H7V2 258 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 SIRPGQ9P1W8 387 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 GULP1Q9UBP9 304 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 AP4E1Q9UPM8 1137 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 OR1A2Q9Y585 309 aa20.94■□□□□ 0.94
TRAPPC3-208ENST00000616074 TMEM110-MUSTN1A8MSY1 372 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 EEF2KO00418 725 aaKnown RBP20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 ATMINO43313 823 aaPredicted RBP20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 RASGRP1O95267 797 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 PCCBP05166 539 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 CTSEP14091 401 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 DESP17661 470 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 HTR1BP28222 390 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 PAPOLAP51003 745 aaKnown RBP20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 SKOR1P84550 965 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 SPIDRQ14159 915 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 AGERQ15109 404 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 CFAP58Q5T655 872 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 BRAT1Q6PJG6 821 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 RD3Q7Z3Z2 195 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 KYQ8NBH2 561 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 SYT11Q9BT88 431 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 DHX35Q9H5Z1 703 aaKnown RBP20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 RABGEF1Q9UJ41 708 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 ATP8A1Q9Y2Q0 1164 aa20.93■□□□□ 0.94
TRAPPC3-208ENST00000616074 CDRT15L2A8MXV6 281 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 TMCO5BA8MYB1 307 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 ERVH48-1M5A8F1 160 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 NTN3O00634 580 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 ALPIP09923 528 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 CCDC172P0C7W6 258 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 PSMA2P25787 234 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 SRP54P61011 504 aaKnown RBP20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 MAMLD1Q13495 774 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 KCTD16Q68DU8 428 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 IRF2BP2Q7Z5L9 587 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 ZNF843Q8N446 348 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 ARFGAP1Q8N6T3 406 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 TSEN2Q8NCE0 465 aaKnown RBP20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 WDR36Q8NI36 951 aaKnown RBP20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 CCDC74AQ96AQ1 378 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 TUBGCP5Q96RT8 1024 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 PEBP4Q96S96 227 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 KCTD15Q96SI1 283 aaPredicted RBP20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 DONSONQ9NYP3 566 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 KLQ9UEF7 1012 aa20.92■□□□□ 0.94
TRAPPC3-208ENST00000616074 ARHGAP42A6NI28 874 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 ATP1A3P13637 1013 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 TNFAIP3P21580 790 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 CSNK1DP48730 415 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 MTM1Q13496 603 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 LVRNQ6Q4G3 990 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 SRLQ86TD4 932 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 GKN2Q86XP6 184 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 ARHGAP12Q8IWW6 846 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 PLA2G15Q8NCC3 412 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 SCG3Q8WXD2 468 aaKnown RBP20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 PDXPQ96GD0 296 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 WDR92Q96MX6 357 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 SNRNP25Q9BV90 132 aaKnown RBP20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 ATP13A3Q9H7F0 1226 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 PARVAQ9NVD7 372 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 PCSK1NQ9UHG2 260 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 GPR34Q9UPC5 381 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 SSUH2Q9Y2M2 353 aa20.91■□□□□ 0.94
TRAPPC3-208ENST00000616074 CCDC187A0A096LP49 1063 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 PALMO75781 387 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 TNFSF15O95150 251 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 ERCC2P18074 760 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 SERPINA4P29622 427 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 RHDQ02161 417 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 CFHR1Q03591 330 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 RALGDSQ12967 914 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 TAF1BQ53T94 588 aaPredicted RBP20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 ERMARDQ5T6L9 678 aa20.9■□□□□ 0.94
TRAPPC3-208ENST00000616074 AFMIDQ63HM1 303 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms