RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 PRPSAP2O60256 369 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 AVILO75366 819 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 APOEP02649 317 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 DLDP09622 509 aaKnown RBP13.19□□□□□ -0.3
FOXN3-219ENST00000615335 THRAP10827 490 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 PRDX6P30041 224 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 E2F2Q14209 437 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 CNGA3Q16281 694 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 PHKG1Q16816 387 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 DCAF6Q58WW2 860 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 FAM209AQ5JX71 171 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 TTC39BQ5VTQ0 682 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-219ENST00000615335 TRNP1Q6NT89 227 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 SH2D5Q6ZV89 423 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 HFE2Q6ZVN8 426 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 SLC26A11Q86WA9 606 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 TCEAL8Q8IYN2 117 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 SLC26A7Q8TE54 656 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 PTCD2Q8WV60 388 aaKnown RBP13.19□□□□□ -0.3
FOXN3-219ENST00000615335 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 RNF157Q96PX1 679 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 RETREG1Q9H6L5 497 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 POPDC2Q9HBU9 364 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 C6orf203Q9P0P8 240 aaPredicted RBP13.19□□□□□ -0.3
FOXN3-219ENST00000615335 KLHL3Q9UH77 587 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 SATB2Q9UPW6 733 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 YIPF1Q9Y548 306 aa13.19□□□□□ -0.3
FOXN3-219ENST00000615335 MYO16Q9Y6X6 1858 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 DYTNA2CJ06 578 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 TTC34A8MYJ7 566 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 GLUD1P00367 558 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 LTFP02788 710 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 ENO1P06733 434 aaKnown RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 YWHAQP27348 245 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 SDC4P31431 198 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 ALDH3B2P48448 385 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 TUBA1BP68363 451 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 TWF1Q12792 350 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 TAF12Q16514 161 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 CDO1Q16878 200 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 C15orf59Q2T9L4 293 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 CYP4V2Q6ZWL3 525 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 TUBA1AQ71U36 451 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 PRPF39Q86UA1 669 aaKnown RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 CTAGE3PQ8IX95 158 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 DEFB106AQ8N104 65 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 DCUN1D1Q96GG9 259 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 PRR11Q96HE9 360 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 FRMD8Q9BZ67 464 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 PAIP1Q9H074 479 aaKnown RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.18□□□□□ -0.39e-10■■■■■ 56.1
FOXN3-219ENST00000615335 MAFFQ9ULX9 164 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 SOX13Q9UN79 622 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 GREB1Q4ZG55 1949 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 SLC38A8A6NNN8 435 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 TRIM49D1C9J1S8 452 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 COPEO14579 308 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 KCNN4O15554 427 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 AQP9O43315 295 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 NCAM1P13591 858 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 MATKP42679 507 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 CPA2P48052 419 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 MLLT1Q03111 559 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 CCDC14Q49A88 953 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 RAB6CQ53S08 254 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 BSPRYQ5W0U4 402 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 PDE12Q6L8Q7 609 aaKnown RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 LILRA6Q6PI73 481 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 RNF111Q6ZNA4 994 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 ARCQ7LC44 396 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 RBM23Q86U06 439 aaKnown RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 SCML4Q8N228 414 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 TRIML2Q8N7C3 387 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 PPM1NQ8N819 430 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 SLC7A14Q8TBB6 771 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 EDEM1Q92611 657 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 FBXO32Q969P5 355 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 CLPTM1LQ96KA5 538 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 NMUR2Q9GZQ4 415 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 RAB6CQ9H0N0 254 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 KCNK4Q9NYG8 393 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 RABL2AQ9UBK7 228 aaPredicted RBP13.18□□□□□ -0.3
FOXN3-219ENST00000615335 CDH7Q9ULB5 785 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 ERVK-11Q9UQG0 969 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 SCML2Q9UQR0 700 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 INSL5Q9Y5Q6 135 aa13.18□□□□□ -0.3
FOXN3-219ENST00000615335 PLXNA3P51805 1871 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 PER2O15055 1255 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 FAM155BO75949 473 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 KRT37O76014 449 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 TFPTP0C1Z6 253 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 CLCN4P51793 760 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 EPHB3P54753 998 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 SMAD3P84022 425 aaKnown RBP13.17□□□□□ -0.3
FOXN3-219ENST00000615335 CBLBQ13191 982 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 PDK2Q15119 407 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 SYPL2Q5VXT5 272 aa13.17□□□□□ -0.3
FOXN3-219ENST00000615335 BHLHA9Q7RTU4 235 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms