RNA–Protein interactions for RNA: ENST00000615230.4

TNFRSF9-204, Transcript of TNF receptor superfamily member 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TNFRSF9, Length 5,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-204ENST00000615230 NOP53Q9NZM5 478 aaKnown RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 HCN3Q9P1Z3 774 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 hCG_1818297A0A087WSY0 165 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 MATN3O15232 486 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF217O75362 1048 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ABHD2P08910 425 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 HCAR3P49019 387 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 SMIM11AP58511 58 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ATP13A4Q4VNC1 1196 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC9B2Q86UD5 537 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 NRSN1Q8IZ57 195 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 RAB7BQ96AH8 199 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 FAM83CQ9BQN1 747 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 NUSAP1Q9BXS6 441 aaKnown RBP9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZCWPW1Q9H0M4 648 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZDHHC7Q9NXF8 308 aa9.79□□□□□ -0.84
TNFRSF9-204ENST00000615230 KLHL33A6NCF5 533 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 CXCR3P49682 368 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 C2CD6Q53TS8 623 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 ARMC3Q5W041 872 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 TMC5Q6UXY8 1006 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 METTL6Q8TCB7 284 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 SIPA1Q96FS4 1042 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 NSL1Q96IY1 281 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC25A51Q9H1U9 297 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 GBA3Q9H227 469 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 CCDC134Q9H6E4 229 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 SPATA6Q9NWH7 488 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 FBXW11Q9UKB1 542 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 SNX8Q9Y5X2 465 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 TISP43B9A030 160 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 C8GP07360 202 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 OR4Q2P0C623 313 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 TPH1P17752 444 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 SERPINB5P36952 375 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 STXBP1P61764 594 aaKnown RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 CHRNB3Q05901 458 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 PTP4A2Q12974 167 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 LRRC14Q15048 493 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 MIER2Q8N344 545 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 HNRNPLLQ8WVV9 542 aaKnown RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 AP2M1Q96CW1 435 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 CCT7Q99832 543 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 SCML1Q9UN30 329 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 AKAP10O43572 662 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 FYNP06241 537 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 GOT1P17174 413 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 ELK3P41970 407 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 ST3GAL1Q11201 340 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 TAF1AQ15573 450 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 IL17AQ16552 155 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 OR10G6Q8NH81 332 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 QKIQ96PU8 341 aaKnown RBP eCLIP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 FAM111AQ96PZ2 611 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 MRPL57Q9BQC6 102 aaKnown RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 CCM2Q9BSQ5 444 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 AGO3Q9H9G7 860 aaKnown RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 MID1IP1Q9NPA3 183 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 TRIM10Q9UDY6 481 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 VPS4AQ9UN37 437 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 UBXN7O94888 489 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 EPN2O95208 641 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 NUDT14O95848 222 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 CCND1P24385 295 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 RFX3P48380 749 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 NUP107P57740 925 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 TOMM20Q15388 145 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 PLEKHA7Q6IQ23 1121 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 TAPT1Q6NXT6 567 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 GSPT2Q8IYD1 628 aaKnown RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 GPR152Q8TDT2 470 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 SGF29Q96ES7 293 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 P2RY13Q9BPV8 354 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 POMKQ9H5K3 350 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 SH3BP4Q9P0V3 963 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 ADGRE2Q9UHX3 823 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 ANGPT4Q9Y264 503 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 A0A096LPK6 155 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 RPL22P35268 128 aaKnown RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 PSMD4P55036 377 aaKnown RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 BNC1Q01954 994 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 KCNMA1Q12791 1236 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 FOXR1Q6PIV2 292 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF852Q6ZMS4 543 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 PRR23CQ6ZRP0 262 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 DET1Q7L5Y6 550 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 ZNF513Q8N8E2 541 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 FOXJ1Q92949 421 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 KIAA1143Q96AT1 154 aaPredicted RBP9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 LRIG1Q96JA1 1093 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 OSBPL2Q9H1P3 480 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 GOLGA2P5Q9HBQ8 144 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 PCDH18Q9HCL0 1135 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 KRT84Q9NSB2 600 aa9.78□□□□□ -0.84
TNFRSF9-204ENST00000615230 E2F8A0AVK6 867 aa9.77□□□□□ -0.84
TNFRSF9-204ENST00000615230 IPO13O94829 963 aaKnown RBP9.77□□□□□ -0.84
TNFRSF9-204ENST00000615230 SRPRAP08240 638 aaKnown RBP9.77□□□□□ -0.84
TNFRSF9-204ENST00000615230 SLC29A2Q14542 456 aa9.77□□□□□ -0.84
TNFRSF9-204ENST00000615230 CRYBG2Q8N1P7 616 aa9.77□□□□□ -0.84
TNFRSF9-204ENST00000615230 BTN2A2Q8WVV5 523 aa9.77□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms