RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 PLPP6Q8IY26 295 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 PCDH20Q8N6Y1 951 aaKnown RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 SPATA22Q8NHS9 363 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 LRRC39Q96DD0 335 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 MRGPRX3Q96LB0 322 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 MRGPRX2Q96LB1 330 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 TBL1YQ9BQ87 522 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 CASS4Q9NQ75 786 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 ERVW-1Q9UQF0 538 aa11.55□□□□□ -0.56
SLIRP-212ENST00000613856 FCF1Q9Y324 198 aaKnown RBP11.55□□□□□ -0.56
SLIRP-212ENST00000613856 ABCA7Q8IZY2 2146 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 CKAP5Q14008 2032 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 ALOX15BO15296 676 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 SMAD6O43541 496 aaKnown RBP11.54□□□□□ -0.56
SLIRP-212ENST00000613856 ZNF821O75541 412 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-212ENST00000613856 IGSF6O95976 241 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 EPOP01588 193 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 CNR2P34972 360 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 SLC6A11P48066 632 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 STK19P49842 368 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-212ENST00000613856 WNT3AP56704 352 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 KDSRQ06136 332 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 ITKQ08881 620 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 IHHQ14623 411 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 FNBP1LQ5T0N5 605 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 SYCP2LQ5T4T6 812 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 NAIF1Q69YI7 327 aaPredicted RBP11.54□□□□□ -0.56
SLIRP-212ENST00000613856 TRMT10CQ7L0Y3 403 aaKnown RBP11.54□□□□□ -0.56
SLIRP-212ENST00000613856 CCDC25Q86WR0 208 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 ATP11CQ8NB49 1132 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 IPMKQ8NFU5 416 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 CSGALNACT1Q8TDX6 532 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 MSANTD3Q96H12 275 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 FEM1CQ96JP0 617 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 GDAP1L1Q96MZ0 367 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 PWWP2AQ96N64 755 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 TTC25Q96NG3 672 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 FSD1LQ9BXM9 530 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 ARNT2Q9HBZ2 717 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 SAYSD1Q9NPB0 183 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 ELOVL2Q9NXB9 296 aa11.54□□□□□ -0.56
SLIRP-212ENST00000613856 PKD1L2Q7Z442 2459 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 LOC285095A0A1B0GVY8 99 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 SRRM3A6NNA2 597 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 PRRT4C9JH25 899 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 K7ERQ8 282 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 PMPCBO75439 489 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 RPP40O75818 363 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 KAT7O95251 611 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 TSHRP16473 764 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 CA4P22748 312 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 MPLP40238 635 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 NNMTP40261 264 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 GRIA1P42261 906 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 GRIA2P42262 883 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 MAGEA4P43358 317 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 TNNT3P45378 269 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 SCNN1BP51168 640 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 NOVA1P51513 510 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 PMS2P54278 862 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 SNRPD1P62314 119 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 MESP2Q0VG99 397 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 CDH17Q12864 832 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 PDIA2Q13087 525 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 E2F5Q15329 346 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 PTPRNQ16849 979 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 MSS51Q4VC12 460 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 CCDC38Q502W7 563 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 NCEH1Q6PIU2 408 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 RANBP10Q6VN20 620 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 NUDT18Q6ZVK8 323 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 SRLQ86TD4 932 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 OR2AP1Q8NGE2 309 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 FRS2Q8WU20 508 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 GAB3Q8WWW8 586 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 MYO19Q96H55 970 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 EXOC2Q96KP1 924 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 RPL10LQ96L21 214 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 TRIB3Q96RU7 358 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 WDR83Q9BRX9 315 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 FICDQ9BVA6 458 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 TDRD1Q9BXT4 1180 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 CIPCQ9C0C6 399 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 PABPC3Q9H361 631 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 CDC42EP4Q9H3Q1 356 aaKnown RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 C8orf33Q9H7E9 229 aaPredicted RBP11.53□□□□□ -0.56
SLIRP-212ENST00000613856 NOD2Q9HC29 1040 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 UBP1Q9NZI7 540 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 SLC8A2Q9UPR5 921 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 TEX264Q9Y6I9 313 aa11.53□□□□□ -0.56
SLIRP-212ENST00000613856 FREM2Q5SZK8 3169 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 C4orf47A7E2U8 309 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 WASH3PC4AMC7 463 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 SOCS5O75159 536 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 GJB3O75712 270 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 TTC4O95801 387 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 APODP05090 189 aa11.52□□□□□ -0.57
SLIRP-212ENST00000613856 FGF1P05230 155 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms