RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 IFI44Q8TCB0 444 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 CPLX3Q8WVH0 158 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 HNRNPLLQ8WVV9 542 aaKnown RBP17.49■□□□□ 0.39
PRKN-209ENST00000612485 HSPH1Q92598 858 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 GLMNQ92990 594 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 PSKH2Q96QS6 385 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 THAP2Q9H0W7 228 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 ABCG4Q9H172 646 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.49■□□□□ 0.39
PRKN-209ENST00000612485 IP6K2Q9UHH9 426 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 COQ6Q9Y2Z9 468 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 LUC7L2Q9Y383 392 aaKnown RBP17.49■□□□□ 0.39
PRKN-209ENST00000612485 U3KQA8 63 aa17.49■□□□□ 0.39
PRKN-209ENST00000612485 A0A087WV48 116 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 MYF5P13349 255 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 HTR1BP28222 390 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 HSPA9P38646 679 aaKnown RBP17.48■□□□□ 0.39
PRKN-209ENST00000612485 SCNN1BP51168 640 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 AP1S1P61966 158 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 SEMG2Q02383 582 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 LBRQ14739 615 aaKnown RBP17.48■□□□□ 0.39
PRKN-209ENST00000612485 NR0B2Q15466 257 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 NFKBIBQ15653 356 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 WSCD2Q2TBF2 565 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 PRRT3Q5FWE3 981 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 CDCP2Q5VXM1 449 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 POLNQ7Z5Q5 900 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 ZSWIM9Q86XI8 627 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 NIPA2Q8N8Q9 360 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 ATL2Q8NHH9 583 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 MAPK15Q8TD08 544 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 TEKT4Q8WW24 435 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 ECHDC3Q96DC8 303 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 DEPDC7Q96QD5 511 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 TCEAL2Q9H3H9 227 aaPredicted RBP17.48■□□□□ 0.39
PRKN-209ENST00000612485 ANAPC7Q9UJX3 599 aa17.48■□□□□ 0.39
PRKN-209ENST00000612485 URB1O60287 2271 aaKnown RBP17.47■□□□□ 0.39
PRKN-209ENST00000612485 ADAMTS20P59510 1910 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.47■□□□□ 0.39
PRKN-209ENST00000612485 LMO7DNF2Z398 122 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 ANXA6P08133 673 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 RARAP10276 462 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 TCF4P15884 667 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 AMPD1P23109 780 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 SERPINB6P35237 376 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 RPIAP49247 311 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 ADKP55263 362 aaKnown RBP17.47■□□□□ 0.39
PRKN-209ENST00000612485 C1orf61Q13536 156 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 ZNF235Q14590 738 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 NFATC4Q14934 902 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 CDKN3Q16667 212 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 BBS5Q8N3I7 341 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 FSTL5Q8N475 847 aaPredicted RBP17.47■□□□□ 0.39
PRKN-209ENST00000612485 NSMCE1Q8WV22 266 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 CSPG4P5Q96PW8 444 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 LRRC61Q9BV99 259 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 NUP85Q9BW27 656 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 MYLKQ15746 1914 aa17.47■□□□□ 0.39
PRKN-209ENST00000612485 ZFYVE26Q68DK2 2539 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 A0A087X0T9 212 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 A0A1W2PQ67 120 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 CPED1A4D0V7 1026 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 EME2A4GXA9 379 aaPredicted RBP17.46■□□□□ 0.39
PRKN-209ENST00000612485 MYO1FO00160 1098 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 MUSKO15146 869 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 GCATO75600 419 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 PRKCGP05129 697 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 PCCBP05166 539 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 CYP1A2P05177 515 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 TPM3P06753 285 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 ELFN1P0C7U0 828 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 FAM228BP0C875 321 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 SLC10A7Q0GE19 358 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 MTM1Q13496 603 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 INPP5AQ14642 412 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 ELOCQ15369 112 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 CCDC122Q5T0U0 273 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 C6orf132Q5T0Z8 1188 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 ALKBH5Q6P6C2 394 aaKnown RBP17.46■□□□□ 0.39
PRKN-209ENST00000612485 ENPP7Q6UWV6 458 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 DPPA4Q7L190 304 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 EFL1Q7Z2Z2 1120 aaKnown RBP17.46■□□□□ 0.39
PRKN-209ENST00000612485 PDZD3Q86UT5 571 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 TP53INP2Q8IXH6 220 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 ATPAF2Q8N5M1 289 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 TPCN2Q8NHX9 752 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 BTBD6Q96KE9 485 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 DCBLD2Q96PD2 775 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 APOOQ9BUR5 198 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 BOCQ9BWV1 1114 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 PCDH18Q9HCL0 1135 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 ETNK2Q9NVF9 386 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 IFNKQ9P0W0 207 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 PNMA8BQ9ULN7 279 aaPredicted RBP17.46■□□□□ 0.39
PRKN-209ENST00000612485 DOLKQ9UPQ8 538 aa17.46■□□□□ 0.39
PRKN-209ENST00000612485 TRAFD1O14545 582 aaPredicted RBP17.45■□□□□ 0.38
PRKN-209ENST00000612485 RASGRP1O95267 797 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 GYPCP04921 128 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 ALPIP09923 528 aa17.45■□□□□ 0.38
PRKN-209ENST00000612485 CTSEP14091 401 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms