RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 TMEM102Q8N9M5 508 aaPredicted RBP14.14□□□□□ -0.15
COL6A1-207ENST00000612273 CNDP1Q96KN2 507 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 CYP2S1Q96SQ9 504 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 VTI1BQ9UEU0 232 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 BCAP29Q9UHQ4 241 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 RNF11Q9Y3C5 154 aa14.14□□□□□ -0.15
COL6A1-207ENST00000612273 COL1A2P08123 1366 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 UBA6A0AVT1 1052 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-207ENST00000612273 TRPC5OSA6NMA1 111 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 UBFD1O14562 309 aaKnown RBP14.13□□□□□ -0.15
COL6A1-207ENST00000612273 IPO13O94829 963 aaKnown RBP14.13□□□□□ -0.15
COL6A1-207ENST00000612273 ASLP04424 464 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 RGS2P41220 211 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 SCNN1BP51168 640 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 FOXA1P55317 472 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 ARPP19P56211 112 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 SLC10A7Q0GE19 358 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 PFKFB4Q16877 469 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 PIWIL4Q7Z3Z4 852 aaKnown RBP14.13□□□□□ -0.15
COL6A1-207ENST00000612273 ARHGAP12Q8IWW6 846 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 OFCC1Q8IZS5 231 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 ADCY4Q8NFM4 1077 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 DNAJB14Q8TBM8 379 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 KCTD13Q8WZ19 329 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 MRPL57Q9BQC6 102 aaKnown RBP14.13□□□□□ -0.15
COL6A1-207ENST00000612273 ST3GAL5Q9UNP4 418 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 TRAF6Q9Y4K3 522 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 TIMM22Q9Y584 194 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 A0A0U1RQS6 177 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 PRSS51A0A1B0GVH4 220 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 TMX2-CTNND1H3BSU7 103 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 MAFKO60675 156 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 H2AFYO75367 372 aaKnown RBP14.13□□□□□ -0.15
COL6A1-207ENST00000612273 LINC00032P0C843 101 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 KCNE1P15382 129 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 SLC5A2P31639 672 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 XIAPP98170 497 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 ZFP1Q6P2D0 407 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 CYGBQ8WWM9 190 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 NTAN1Q96AB6 310 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 SMARCD1Q96GM5 515 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 MRGPRX2Q96LB1 330 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 ABI2Q9NYB9 513 aaPredicted RBP14.13□□□□□ -0.15
COL6A1-207ENST00000612273 FAM50BQ9Y247 325 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 ANKRD6Q9Y2G4 727 aa14.13□□□□□ -0.15
COL6A1-207ENST00000612273 DENRO43583 198 aaKnown RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 ANXA9O76027 345 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SNRPB2P08579 225 aaKnown RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 MTHFD1P11586 935 aaKnown RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 NCK1P16333 377 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 ZNF26P17031 533 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 APLP1P51693 650 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 CDKN2DP55273 166 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 STX5Q13190 355 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 IKBKEQ14164 716 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SETD3Q86TU7 594 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 TBATAQ96M53 351 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SMIM14Q96QK8 99 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SENP6Q9GZR1 1112 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 MAF1Q9H063 256 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 ACTL7AQ9Y615 435 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 H3BMM5 538 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 PSEN2P49810 448 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 KLC3Q6P597 504 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 VPS33AQ96AX1 596 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 TUBGCP3Q96CW5 907 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SLC9A7Q96T83 725 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 MID1IP1Q9NPA3 183 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SPAG4Q9NPE6 437 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 IGSF5Q9NSI5 407 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 CROTQ9UKG9 612 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 RAB26Q9ULW5 256 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SMIM35A0A1B0GVV1 85 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 ARHGAP10A1A4S6 786 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 KLHL33A6NCF5 533 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SOCS2O14508 198 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 GABRDO14764 452 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 STAMBPO95630 424 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 F9P00740 461 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 HAPLN1P10915 354 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 PAMP19021 973 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 YAP1P46937 504 aaKnown RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 STX1BP61266 288 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 HECTD2Q5U5R9 776 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 AGAP9Q5VTM2 703 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 DCLRE1AQ6PJP8 1040 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 CBR4Q8N4T8 237 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 TRPC4APQ8TEL6 797 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 NUDT8Q8WV74 236 aa14.12□□□□□ -0.15
COL6A1-207ENST00000612273 SEMA4BQ9NPR2 832 aaPredicted RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 UTP6Q9NYH9 597 aaKnown RBP14.12□□□□□ -0.15
COL6A1-207ENST00000612273 A0A1B0GTL3 188 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 ARL5CA6NH57 179 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 UBXN8O00124 270 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 NRP2O60462 931 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 SOAT2O75908 522 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 SRP72O76094 671 aaKnown RBP14.11□□□□□ -0.15
COL6A1-207ENST00000612273 CNTN5O94779 1100 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 BAIAP3O94812 1187 aa14.11□□□□□ -0.15
COL6A1-207ENST00000612273 GFAPP14136 432 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms