RNA–Protein interactions for RNA: ENST00000611598.1

PCDHGB1-202, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGB1, Length 2,592 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-202ENST00000611598 OTUD5Q96G74 571 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 C3orf30Q96M34 536 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 SLC25A23Q9BV35 468 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 TRIM8Q9BZR9 551 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 TUT1Q9H6E5 874 aaKnown RBP15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 PLGRKTQ9HBL7 147 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 RALGAPA2Q2PPJ7 1873 aa15.22■□□□□ 0.03
PCDHGB1-202ENST00000611598 NME4O00746 187 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 IPO13O94829 963 aaKnown RBP15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 SLC25A27O95847 323 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 ALDOCP09972 364 aaKnown RBP15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 USP17L7P0C7H9 530 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 CPB1P15086 417 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 TPP2P29144 1249 aaPredicted RBP15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 TAF6P49848 677 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 NUP107P57740 925 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 NOMO2Q5JPE7 1267 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 SPPL2CQ8IUH8 684 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 SMYD1Q8NB12 490 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 GFM2Q969S9 779 aaKnown RBP15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 VAT1Q99536 393 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 TKTL2Q9H0I9 626 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 FAIMQ9NVQ4 179 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 GIMAP2Q9UG22 337 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 FBXO5Q9UKT4 447 aa15.21■□□□□ 0.03
PCDHGB1-202ENST00000611598 DFFAO00273 331 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 DNAJB1P25685 340 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 HCAR3P49019 387 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 SLC5A3P53794 718 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 SLC12A2P55011 1212 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 DAOAP59103 153 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 PFKPQ01813 784 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZBED5Q49AG3 693 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 KCTD21Q4G0X4 260 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 TBCELQ5QJ74 424 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 WSCD1Q658N2 575 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 Q6ZNX1 250 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 LINC00523Q86TU6 105 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 C2CD4AQ8NCU7 369 aaPredicted RBP15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 KCTD13Q8WZ19 329 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 FBXL20Q96IG2 436 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 SLC45A3Q96JT2 553 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZNF560Q96MR9 790 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 ADI1Q9BV57 179 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 COLEC11Q9BWP8 271 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 BRD8Q9H0E9 1235 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 UPF3AQ9H1J1 476 aaKnown RBP15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 ADAMTS10Q9H324 1103 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 ARMC1Q9NVT9 282 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 PTGDR2Q9Y5Y4 395 aa15.21■□□□□ 0.02
PCDHGB1-202ENST00000611598 NRCAMQ92823 1304 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 A0A087WXM4 84 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 A0A087X1B8 175 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 TRIM64CA6NLI5 447 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 LILRA4P59901 499 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 SEPT6Q14141 434 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 PSMD5Q16401 504 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 FAM83EQ2M2I3 478 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 INTS6LQ5JSJ4 861 aaKnown RBP15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 TAPT1Q6NXT6 567 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 LYSMD3Q7Z3D4 306 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 LIMS2Q7Z4I7 341 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 SHCBP1Q8NEM2 672 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 ANKRD49Q8WVL7 239 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 VPS45Q9NRW7 570 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZNHIT2Q9UHR6 403 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 TCAF1Q9Y4C2 921 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 TRAF6Q9Y4K3 522 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 PMPCBO75439 489 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 OXTRP30559 389 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 ESRRGP62508 458 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 MAP7D1Q3KQU3 841 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 NOTUMQ6P988 496 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 LARP4Q71RC2 724 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 ANKRD23Q86SG2 305 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 PATL1Q86TB9 770 aaKnown RBP15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 OFCC1Q8IZS5 231 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 PPHLN1Q8NEY8 458 aaKnown RBP15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 FAR2Q96K12 515 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 RPL10LQ96L21 214 aaKnown RBP15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 GSTO2Q9H4Y5 243 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 ELP3Q9H9T3 547 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 CCM2LQ9NUG4 571 aaPredicted RBP15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 MAP10Q9P2G4 905 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 CLEC11AQ9Y240 323 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 ZNF711Q9Y462 761 aa15.2■□□□□ 0.02
PCDHGB1-202ENST00000611598 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 NR5A2O00482 541 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CD4P01730 458 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CHRM3P20309 590 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 MYF6P23409 242 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 ADCYAP1R1P41586 468 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 KCNC1P48547 511 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 MERTKQ12866 999 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 PPIL2Q13356 520 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 PMS2P3Q13401 168 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CAPRIN1Q14444 709 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 RWDD4Q6NW29 188 aaKnown RBP15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 CROCCP3Q8IVE0 287 aa15.19■□□□□ 0.02
PCDHGB1-202ENST00000611598 MFSD2AQ8NA29 543 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms