RNA–Protein interactions for RNA: ENST00000604967.1

TUBE1-210, Transcript of tubulin epsilon 1, humanhuman

TSL 5

Gene TUBE1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-210ENST00000604967 ZNF599Q96NL3 588 aa10.75□□□□□ -0.69
TUBE1-210ENST00000604967 TUBGCP5Q96RT8 1024 aa10.75□□□□□ -0.69
TUBE1-210ENST00000604967 HERPUD2Q9BSE4 406 aa10.75□□□□□ -0.69
TUBE1-210ENST00000604967 CINPQ9BW66 212 aaPredicted RBP10.75□□□□□ -0.69
TUBE1-210ENST00000604967 DTLQ9NZJ0 730 aa10.75□□□□□ -0.69
TUBE1-210ENST00000604967 MSRB2Q9Y3D2 182 aa10.75□□□□□ -0.69
TUBE1-210ENST00000604967 PCDHB9Q9Y5E1 797 aa10.75□□□□□ -0.69
TUBE1-210ENST00000604967 ITPR1Q14643 2758 aa10.75□□□□□ -0.69
TUBE1-210ENST00000604967 COL27A1Q8IZC6 1860 aaPredicted RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 TDRD6O60522 2096 aaKnown RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 K7ESM1 405 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 NEMP1O14524 444 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 ENC1O14682 589 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 FFAR2O15552 330 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 LCA5LO95447 670 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CSF2P04141 144 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 TPM3P06753 285 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 NME1P15531 152 aaKnown RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 FECHP22830 423 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 LHCGRP22888 699 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 GARSP41250 739 aaKnown RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CCDC15Q0P6D6 951 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 HNRNPDQ14103 355 aaKnown RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 PDE1CQ14123 709 aaPredicted RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 KRT81Q14533 505 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 RFTN1Q14699 578 aaPredicted RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 SUZ12Q15022 739 aaKnown RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 LLGL1Q15334 1064 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 ST3GAL2Q16842 350 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CCDC157Q569K6 752 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 SLC45A4Q5BKX6 768 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 BRAT1Q6PJG6 821 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 LIPIQ6XZB0 460 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 TSPAN33Q86UF1 283 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 SFTPA2Q8IWL1 248 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CNTD1Q8N815 330 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 ZNF548Q8NEK5 533 aaPredicted RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 ARRDC2Q8TBH0 407 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 HCAR2Q8TDS4 363 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 PTCD2Q8WV60 388 aaKnown RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 SPOCK2Q92563 424 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CCDC42Q96M95 316 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 RNF157Q96PX1 679 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 NUDCD1Q96RS6 583 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CDC6Q99741 560 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 NCAPGQ9BPX3 1015 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 ZNF670Q9BS34 389 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 TRIM5Q9C035 493 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CLPBQ9H078 707 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 NT5MQ9NPB1 228 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 DNAJC28Q9NX36 388 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 RCOR3Q9P2K3 495 aaPredicted RBP10.74□□□□□ -0.69
TUBE1-210ENST00000604967 B4GALT6Q9UBX8 382 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 FTSJ1Q9UET6 329 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 SEPT3Q9UH03 358 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 ATP8A1Q9Y2Q0 1164 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CACNA1BQ00975 2339 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 SHROOM3Q8TF72 1996 aa10.74□□□□□ -0.69
TUBE1-210ENST00000604967 CHD6Q8TD26 2715 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 SOWAHDA6NJG2 315 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 SCAMP1O15126 338 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 FZD6O60353 706 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 TM7SF2O76062 418 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 PRLP01236 227 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 FUCA1P04066 466 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 HLA-DQB2P05538 268 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 PROS1P07225 676 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 MMP2P08253 660 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 DESP17661 470 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 COMTP21964 271 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 MMP13P45452 471 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 NOP2P46087 812 aaKnown RBP10.73□□□□□ -0.69
TUBE1-210ENST00000604967 ARRB1P49407 418 aaPredicted RBP10.73□□□□□ -0.69
TUBE1-210ENST00000604967 AP1S1P61966 158 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 DSC2Q02487 901 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 RAD51Q06609 339 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 ZBTB17Q13105 803 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 SGCGQ13326 291 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 AGERQ15109 404 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 TCEA2Q15560 299 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 SMAD1Q15797 465 aaKnown RBP10.73□□□□□ -0.69
TUBE1-210ENST00000604967 CNGA3Q16281 694 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 TAZQ16635 292 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 ALG1LQ6GMV1 187 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 MFSD7Q6UXD7 560 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 RAD9BQ6WBX8 426 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 DPPA4Q7L190 304 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 TMPRSS7Q7RTY8 843 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 TMEM139Q8IV31 216 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 ATPAF2Q8N5M1 289 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.73□□□□□ -0.69
TUBE1-210ENST00000604967 KDF1Q8NAX2 398 aaPredicted RBP10.73□□□□□ -0.69
TUBE1-210ENST00000604967 KCTD6Q8NC69 237 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 DENND6BQ8NEG7 585 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 PIH1D2Q8WWB5 315 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 RFFLQ8WZ73 363 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 SKA1Q96BD8 255 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 COQ10AQ96MF6 247 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 LGMNQ99538 433 aa10.73□□□□□ -0.69
TUBE1-210ENST00000604967 LGR4Q9BXB1 951 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms