RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 GNSP15586 552 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 NFKB1P19838 968 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 BCKDHBP21953 392 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CD27P26842 260 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CASQ1P31415 396 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 FDFT1P37268 417 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CD86P42081 329 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ABL2P42684 1182 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PAFAH1B1P43034 410 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 METAP1P53582 386 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CDK18Q07002 472 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 NIPAL4Q0D2K0 466 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 OVGP1Q12889 678 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PARP6Q2NL67 630 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TMEM52BQ4KMG9 183 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ARMC3Q5W041 872 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TBC1D3GQ6DHY5 549 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TBC1D3CQ6IPX1 549 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PRR23BQ6ZRT6 265 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 DPPA4Q7L190 304 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CYP2U1Q7Z449 544 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PRPF39Q86UA1 669 aaKnown RBP9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 FAM124AQ86V42 546 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 IQCHQ86VS3 1027 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 SYT12Q8IV01 421 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TBC1D3Q8IZP1 549 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 FAM160A2Q8N612 972 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PRELID2Q8N945 189 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CCDC89Q8N998 374 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CCHCR1Q8TD31 782 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 COG1Q8WTW3 980 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ATG4AQ8WYN0 398 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 HSPA12BQ96MM6 686 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 LENG8Q96PV6 779 aaPredicted RBP9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TRIB3Q96RU7 358 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TMEM121Q9BTD3 319 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 FSD1LQ9BXM9 530 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CDH19Q9H159 772 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TRABDQ9H4I3 376 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 EIF2B3Q9NR50 452 aaKnown RBP9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 HACD3Q9P035 362 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PAK5Q9P286 719 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PCDHB9Q9Y5E1 797 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PCDHGC4Q9Y5F7 938 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TRPM6Q9BX84 2022 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CACNA1EQ15878 2313 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 OTOGLQ3ZCN5 2332 aa9.54□□□□□ -0.88
SQSTM1P1-201ENST00000603451 NUMA1Q14980 2115 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ZNF106Q9H2Y7 1883 aaKnown RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 WDFY4Q6ZS81 3184 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 LOC285095A0A1B0GVY8 99 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 A0A1W2PPC4 97 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ANKRD66B4E2M5 251 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 AP3B1O00203 1094 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 SPINT1O43278 529 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 MAGEC1O60732 1142 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 NDST3O95803 873 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 FGF1P05230 155 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 IGHV4-34P06331 123 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ELFN1P0C7U0 828 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TIMP2P16035 220 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 GKP32189 559 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 VIPR1P32241 457 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CD68P34810 354 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 AFF3P51826 1226 aaKnown RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 EPHB1P54762 984 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 RACK1P63244 317 aaKnown RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CDK16Q00536 496 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CREB5Q02930 508 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 NAPEPLDQ6IQ20 393 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 SYDE1Q6ZW31 735 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 LINC00523Q86TU6 105 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CREG2Q8IUH2 290 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 FAM71DQ8N9W8 422 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ATL2Q8NHH9 583 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CXorf40AQ8TE69 158 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PDCD6IPQ8WUM4 868 aaKnown RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PIH1D2Q8WWB5 315 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 C1orf54Q8WWF1 131 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 RUBCNQ92622 972 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 SKA1Q96BD8 255 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 BIRC7Q96CA5 298 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 IFT43Q96FT9 208 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 C16orf45Q96MC5 204 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 RBM15Q96T37 977 aaKnown RBP eCLIP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 C1QTNF2Q9BXJ5 285 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 C6orf106Q9H6K1 298 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 LRRC40Q9H9A6 602 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ARNT2Q9HBZ2 717 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 MAGEE1Q9HCI5 957 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PCDH12Q9NPG4 1184 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 CD93Q9NPY3 652 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 NFKBIL1Q9UBC1 381 aaPredicted RBP9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PCYOX1Q9UHG3 505 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 PILRBQ9UKJ0 227 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 ABCA7Q8IZY2 2146 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 LRRK1Q38SD2 2015 aa9.53□□□□□ -0.88
SQSTM1P1-201ENST00000603451 TP53BP1Q12888 1972 aaPredicted RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms