RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 MATN3O15232 486 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 MMP20O60882 483 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 C6P13671 934 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 ITIH2P19823 946 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 CCNCP24863 283 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 IGFALSP35858 605 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 GBE1Q04446 702 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 SPA17Q15506 151 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 ZFYVE27Q5T4F4 411 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 SLC9A4Q6AI14 798 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 DPPA4Q7L190 304 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 PARGQ86W56 976 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 TP53I13Q8NBR0 393 aaPredicted RBP17.31■□□□□ 0.36
HERC3-214ENST00000601319 HDAC11Q96DB2 347 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 SCUBE2Q9NQ36 999 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 HAUS2Q9NVX0 235 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 DDX56Q9NY93 547 aaKnown RBP17.31■□□□□ 0.36
HERC3-214ENST00000601319 PLXNB3Q9ULL4 1909 aa17.31■□□□□ 0.36
HERC3-214ENST00000601319 FAM221BA6H8Z2 402 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 PSTPIP1O43586 416 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 KRT1P04264 644 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 NME1P15531 152 aaKnown RBP17.3■□□□□ 0.36
HERC3-214ENST00000601319 YPEL5P62699 121 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 RALGDSQ12967 914 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 FZD2Q14332 565 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 C11orf63Q6NUN7 778 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 TMTC1Q8IUR5 882 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 PLD5Q8N7P1 536 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 ZNF830Q96NB3 372 aaPredicted RBP17.3■□□□□ 0.36
HERC3-214ENST00000601319 SCNM1Q9BWG6 230 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 POLR1EQ9GZS1 481 aaKnown RBP17.3■□□□□ 0.36
HERC3-214ENST00000601319 NOD2Q9HC29 1040 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 DTLQ9NZJ0 730 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 PCDHA13Q9Y5I0 950 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 IGF2RP11717 2491 aa17.3■□□□□ 0.36
HERC3-214ENST00000601319 SPOPO43791 374 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 HYAL3O43820 417 aaPredicted RBP17.29■□□□□ 0.36
HERC3-214ENST00000601319 PIAS2O75928 621 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 NDUFA10O95299 355 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 ATXN1LP0C7T5 689 aaKnown RBP17.29■□□□□ 0.36
HERC3-214ENST00000601319 COMTP21964 271 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 DGKAP23743 735 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 CDC25BP30305 580 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 LIG3P49916 1009 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 BNIP3Q12983 259 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 IRF4Q15306 451 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 TAZQ16635 292 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 SLCO6A1Q86UG4 719 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 CALR3Q96L12 384 aaKnown RBP17.29■□□□□ 0.36
HERC3-214ENST00000601319 PCDHGA1Q9Y5H4 931 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 WDFY3Q8IZQ1 3526 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 ASPMQ8IZT6 3477 aa17.29■□□□□ 0.36
HERC3-214ENST00000601319 SOWAHDA6NJG2 315 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 ABCB7O75027 752 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 TOP3BO95985 862 aaKnown RBP17.28■□□□□ 0.36
HERC3-214ENST00000601319 CPP00450 1065 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 CSF2P04141 144 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 ZFXP17010 805 aaPredicted RBP17.28■□□□□ 0.36
HERC3-214ENST00000601319 CES1P23141 567 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 NFKBIAP25963 317 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 THOP1P52888 689 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 MAXP61244 160 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 HNRNPKP61978 463 aaKnown RBP eCLIP17.28■□□□□ 0.36
HERC3-214ENST00000601319 PPIDQ08752 370 aaKnown RBP17.28■□□□□ 0.36
HERC3-214ENST00000601319 SLC10A2Q12908 348 aaPredicted RBP17.28■□□□□ 0.36
HERC3-214ENST00000601319 TRAF2Q12933 501 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 PDE1CQ14123 709 aaPredicted RBP17.28■□□□□ 0.36
HERC3-214ENST00000601319 PTK2BQ14289 1009 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 LRRC14Q15048 493 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 MACC1Q6ZN28 852 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 SLC25A45Q8N413 288 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 EID2Q8N6I1 236 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 PAF1Q8N7H5 531 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.28■□□□□ 0.36
HERC3-214ENST00000601319 CNDP2Q96KP4 475 aaKnown RBP17.28■□□□□ 0.36
HERC3-214ENST00000601319 CNTNAP3BQ96NU0 1288 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 CNTNAP3Q9BZ76 1288 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 NT5MQ9NPB1 228 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 DNAJC28Q9NX36 388 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 PCDHGC4Q9Y5F7 938 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 EPN1Q9Y6I3 576 aaPredicted RBP17.28■□□□□ 0.36
HERC3-214ENST00000601319 FREM2Q5SZK8 3169 aa17.28■□□□□ 0.36
HERC3-214ENST00000601319 TTC24A2A3L6 582 aaPredicted RBP17.27■□□□□ 0.36
HERC3-214ENST00000601319 H3BM21 787 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 ENC1O14682 589 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 APOL1O14791 398 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 SDC3O75056 442 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 PGLSO95336 258 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 IPO7O95373 1038 aaKnown RBP17.27■□□□□ 0.36
HERC3-214ENST00000601319 MAP3K6O95382 1288 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 LDOC1O95751 146 aaPredicted RBP17.27■□□□□ 0.36
HERC3-214ENST00000601319 PRKCGP05129 697 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 ELFN1P0C7U0 828 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 CCNB1P14635 433 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 NOP2P46087 812 aaKnown RBP17.27■□□□□ 0.36
HERC3-214ENST00000601319 PEX5P50542 639 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 ZNF211Q13398 564 aaPredicted RBP17.27■□□□□ 0.36
HERC3-214ENST00000601319 WSCD2Q2TBF2 565 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 PROX2Q3B8N5 592 aa17.27■□□□□ 0.36
HERC3-214ENST00000601319 TPRG1LQ5T0D9 272 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms