RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 DNTTP04053 509 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 TIMP2P16035 220 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 GRIA1P42261 906 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 GRIA4P48058 902 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 CXCL12P48061 93 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 CCR3P51677 355 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 METAP1P53582 386 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 CCDC15Q0P6D6 951 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 CDH17Q12864 832 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 QPCTQ16769 361 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 UGP2Q16851 508 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 POM121L1PQ3SYA9 428 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 ZDHHC24Q6UX98 284 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 ZNF534Q76KX8 674 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 ERN2Q76MJ5 926 aaKnown RBP14.44□□□□□ -0.1
UPF1-211ENST00000600868 PARS2Q7L3T8 475 aaKnown RBP14.44□□□□□ -0.1
UPF1-211ENST00000600868 CAND1Q86VP6 1230 aaKnown RBP14.44□□□□□ -0.1
UPF1-211ENST00000600868 AADATQ8N5Z0 425 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 PAF1Q8N7H5 531 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 LPCAT1Q8NF37 534 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 OR52K1Q8NGK4 314 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 FAM131CQ96AQ9 280 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 RMDN1Q96DB5 314 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 APOL2Q9BQE5 337 aa14.44□□□□□ -0.1
UPF1-211ENST00000600868 XAB2Q9HCS7 855 aaKnown RBP14.44□□□□□ -0.1
UPF1-211ENST00000600868 A0A0J9YYE9 177 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 UPK3BL1B0FP48 263 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 UPK3BL2E5RIL1 263 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 GOLGA8MH3BSY2 632 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 APBB3O95704 486 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 TRBC1P01850 177 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 NFKBIAP25963 317 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 DRD3P35462 400 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 MAGEA3P43357 314 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 CHRNA4P43681 627 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 NEK3P51956 506 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 EPHB1P54762 984 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 PLTPP55058 493 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 CNTN1Q12860 1018 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 CBLBQ13191 982 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 GALNT3Q14435 633 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 ERCC6LQ2NKX8 1250 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 TTC31Q49AM3 519 aaPredicted RBP14.43□□□□□ -0.1
UPF1-211ENST00000600868 USP30Q70CQ3 517 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 TTC7BQ86TV6 843 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 RASSF3Q86WH2 238 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 HDDC3Q8N4P3 179 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 FBXL6Q8N531 539 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 SLC25A41Q8N5S1 370 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 EIF1ADQ8N9N8 165 aaKnown RBP14.43□□□□□ -0.1
UPF1-211ENST00000600868 DNAAF3Q8N9W5 541 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 HMGB4Q8WW32 186 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 RAB7BQ96AH8 199 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 SCRN2Q96FV2 425 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 SERPINB12Q96P63 405 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 HHIPQ96QV1 700 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 MCCC1Q96RQ3 725 aaPredicted RBP14.43□□□□□ -0.1
UPF1-211ENST00000600868 LYSMD1Q96S90 227 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 SRPK1Q96SB4 655 aaKnown RBP14.43□□□□□ -0.1
UPF1-211ENST00000600868 FOXP3Q9BZS1 431 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 SLC6A17Q9H1V8 727 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 EPHX3Q9H6B9 360 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 ZDHHC18Q9NUE0 388 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 FBXL12Q9NXK8 326 aa14.43□□□□□ -0.1
UPF1-211ENST00000600868 SLC7A4O43246 635 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 PPFIA2O75334 1257 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 ACADMP11310 421 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 ADRB3P13945 408 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 XPAP23025 273 aaPredicted RBP14.42□□□□□ -0.1
UPF1-211ENST00000600868 TNFRSF8P28908 595 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 HOXA6P31267 233 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 P2RY2P41231 377 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 NPY2RP49146 381 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 CARSP49589 748 aaKnown RBP14.42□□□□□ -0.1
UPF1-211ENST00000600868 MSLNQ13421 630 aaPredicted RBP14.42□□□□□ -0.1
UPF1-211ENST00000600868 PIP5KL1Q5T9C9 394 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 ARMC3Q5W041 872 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 ANO7Q6IWH7 933 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 FBXL19Q6PCT2 694 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 KIAA1324Q6UXG2 1013 aaKnown RBP14.42□□□□□ -0.1
UPF1-211ENST00000600868 USP45Q70EL2 814 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 KBTBD6Q86V97 674 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 CACUL1Q86Y37 369 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 ZCCHC9Q8N567 271 aaKnown RBP14.42□□□□□ -0.1
UPF1-211ENST00000600868 GPR161Q8N6U8 529 aaKnown RBP14.42□□□□□ -0.1
UPF1-211ENST00000600868 MDGA1Q8NFP4 955 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 FBXO25Q8TCJ0 367 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 IFT81Q8WYA0 676 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 OMDQ99983 421 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 COL25A1Q9BXS0 654 aaPredicted RBP14.42□□□□□ -0.1
UPF1-211ENST00000600868 EPC1Q9H2F5 836 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 MAGEE1Q9HCI5 957 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 PCDH12Q9NPG4 1184 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 ITM2CQ9NQX7 267 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 SPATA6Q9NWH7 488 aaPredicted RBP14.42□□□□□ -0.1
UPF1-211ENST00000600868 BFARQ9NZS9 450 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 HACD3Q9P035 362 aa14.42□□□□□ -0.1
UPF1-211ENST00000600868 BCCIPQ9P287 314 aaKnown RBP eCLIP14.42□□□□□ -0.1
UPF1-211ENST00000600868 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.42□□□□□ -0.16e-7■■■■■ 32.1
UPF1-211ENST00000600868 EBF1Q9UH73 591 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms