RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 PPARDQ03181 441 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 LBRQ14739 615 aaKnown RBP15.92■□□□□ 0.14
VRK3-221ENST00000600284 IRF4Q15306 451 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 WSCD2Q2TBF2 565 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 FAXCQ5TGI0 409 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 TMCO3Q6UWJ1 677 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 ARHGAP36Q6ZRI8 547 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 SDR16C5Q8N3Y7 309 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 TPCN2Q8NHX9 752 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 SPOCK2Q92563 424 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 THAP2Q9H0W7 228 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 CAAP1Q9H8G2 361 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 RALYQ9UKM9 306 aaKnown RBP15.92■□□□□ 0.14
VRK3-221ENST00000600284 APC2O95996 2303 aa15.92■□□□□ 0.14
VRK3-221ENST00000600284 URB1O60287 2271 aaKnown RBP15.92■□□□□ 0.14
VRK3-221ENST00000600284 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.91■□□□□ 0.14
VRK3-221ENST00000600284 LMO7DNF2Z398 122 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 TRAFD1O14545 582 aaPredicted RBP15.91■□□□□ 0.14
VRK3-221ENST00000600284 LZTS3O60299 673 aaPredicted RBP15.91■□□□□ 0.14
VRK3-221ENST00000600284 RARAP10276 462 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 RPIAP49247 311 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 SCNN1BP51168 640 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 PRRT3Q5FWE3 981 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 ALKBH5Q6P6C2 394 aaKnown RBP15.91■□□□□ 0.14
VRK3-221ENST00000600284 C19orf48Q6RUI8 117 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 KDM7AQ6ZMT4 941 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 ZSWIM9Q86XI8 627 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 LRRC49Q8IUZ0 686 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 FSTL5Q8N475 847 aaPredicted RBP15.91■□□□□ 0.14
VRK3-221ENST00000600284 ATL2Q8NHH9 583 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 IFI44Q8TCB0 444 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 CPLX3Q8WVH0 158 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 HSPH1Q92598 858 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 CSPG4P5Q96PW8 444 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 DEPDC7Q96QD5 511 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 APOOQ9BUR5 198 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 BOCQ9BWV1 1114 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 ABCG4Q9H172 646 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.91■□□□□ 0.14
VRK3-221ENST00000600284 RCOR3Q9P2K3 495 aaPredicted RBP15.91■□□□□ 0.14
VRK3-221ENST00000600284 COQ6Q9Y2Z9 468 aa15.91■□□□□ 0.14
VRK3-221ENST00000600284 DSPP15924 2871 aaKnown RBP15.9■□□□□ 0.14
VRK3-221ENST00000600284 A0A087X0T9 212 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 MYO1FO00160 1098 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 MUSKO15146 869 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 GCATO75600 419 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 ANXA6P08133 673 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 FAM228BP0C875 321 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 TCF4P15884 667 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 AMPD1P23109 780 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 SERPINB6P35237 376 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 HK3P52790 923 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 ADKP55263 362 aaKnown RBP15.9■□□□□ 0.14
VRK3-221ENST00000600284 SLC25A11Q02978 314 aaKnown RBP15.9■□□□□ 0.14
VRK3-221ENST00000600284 SLC10A7Q0GE19 358 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 MTM1Q13496 603 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 INPP5AQ14642 412 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 ELOCQ15369 112 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 NR0B2Q15466 257 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 NFKBIBQ15653 356 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 SMTNL2Q2TAL5 461 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 COL28A1Q2UY09 1125 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 DEFB133Q30KQ1 61 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 RALGPS1Q5JS13 557 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 C6orf132Q5T0Z8 1188 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 LVRNQ6Q4G3 990 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 RBFAQ8N0V3 343 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 BBS5Q8N3I7 341 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 HNRNPLLQ8WVV9 542 aaKnown RBP15.9■□□□□ 0.14
VRK3-221ENST00000600284 GRAMD1AQ96CP6 724 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 LRRC61Q9BV99 259 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 NUP85Q9BW27 656 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 TCEAL2Q9H3H9 227 aaPredicted RBP15.9■□□□□ 0.14
VRK3-221ENST00000600284 ETNK2Q9NVF9 386 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 ANAPC7Q9UJX3 599 aa15.9■□□□□ 0.14
VRK3-221ENST00000600284 PNMA8BQ9ULN7 279 aaPredicted RBP15.9■□□□□ 0.14
VRK3-221ENST00000600284 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.9■□□□□ 0.14
VRK3-221ENST00000600284 YY2O15391 372 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 HTRA2O43464 458 aaPredicted RBP15.89■□□□□ 0.13
VRK3-221ENST00000600284 MAFKO60675 156 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 SOCS5O75159 536 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 RASGRP1O95267 797 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 PEX11BO96011 259 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 GYPCP04921 128 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 TPM3P06753 285 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 HOXC4P09017 264 aaPredicted RBP15.89■□□□□ 0.13
VRK3-221ENST00000600284 ALPIP09923 528 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 TSHRP16473 764 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 CR2P20023 1033 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 NFKBIAP25963 317 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 HNRNPH3P31942 346 aaKnown RBP15.89■□□□□ 0.13
VRK3-221ENST00000600284 CDH6P55285 790 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 SEMG2Q02383 582 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 ZNF235Q14590 738 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 NFATC4Q14934 902 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 CDKN3Q16667 212 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 HADHQ16836 314 aaKnown RBP15.89■□□□□ 0.13
VRK3-221ENST00000600284 CCDC122Q5T0U0 273 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 LIPIQ6XZB0 460 aa15.89■□□□□ 0.13
VRK3-221ENST00000600284 DPPA4Q7L190 304 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms