RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 KIAA1328Q86T90 577 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 TEX26Q8N6G2 289 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 PLD5Q8N7P1 536 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 TP53I13Q8NBR0 393 aaPredicted RBP8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 CXorf40AQ8TE69 158 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 RHBDD1Q8TEB9 315 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 NSMCE1Q8WV22 266 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 ADAMTS14Q8WXS8 1223 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 RAPGEF5Q92565 580 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 CENPTQ96BT3 561 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 HDAC11Q96DB2 347 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 IFT43Q96FT9 208 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 TSGA13Q96PP4 275 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 RNF157Q96PX1 679 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 WRAP53Q9BUR4 548 aaKnown RBP8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 C1QTNF7Q9BXJ2 289 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 TSGA10Q9BZW7 698 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 FTSJ1Q9UET6 329 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 APOBEC2Q9Y235 224 aaKnown RBP8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 PCDHA13Q9Y5I0 950 aa8.04□□□□□ -1.12
CHMP2A-205ENST00000600006 TDRD6O60522 2096 aaKnown RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 SPTY2D1-AS1A0A0U1RR47 76 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 FAM221BA6H8Z2 402 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 C3orf70A6NLC5 250 aaPredicted RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 TOR1BO14657 336 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 PJA2O43164 708 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 TNFSF14O43557 240 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 PSTPIP1O43586 416 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 HYAL3O43820 417 aaPredicted RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 SDC3O75056 442 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 PIAS2O75928 621 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 MAP3K6O95382 1288 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 TOP3BO95985 862 aaKnown RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 KRT1P04264 644 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 PRKCGP05129 697 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 CCDC175P0C221 793 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 ATXN1LP0C7T5 689 aaKnown RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 NME1P15531 152 aaKnown RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 MX2P20592 715 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 CCNCP24863 283 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 MAXP61244 160 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 TRAF2Q12933 501 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 BNIP3Q12983 259 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 FZD2Q14332 565 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 IRF4Q15306 451 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 IFI16Q16666 785 aaKnown RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 TPRG1LQ5T0D9 272 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 ZFYVE27Q5T4F4 411 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 C11orf63Q6NUN7 778 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 KDM7AQ6ZMT4 941 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 ZNF662Q6ZS27 426 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 DPPA4Q7L190 304 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 PARGQ86W56 976 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 RHOT1Q8IXI2 618 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 CNTNAP3BQ96NU0 1288 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 SCNM1Q9BWG6 230 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 TMEM121BQ9BXQ6 578 aaPredicted RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 CNTNAP3Q9BZ76 1288 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 POLR1EQ9GZS1 481 aaKnown RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 NOD2Q9HC29 1040 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 SCUBE2Q9NQ36 999 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 MBNL1Q9NR56 388 aaKnown RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 DDX56Q9NY93 547 aaKnown RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 DTLQ9NZJ0 730 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 AMACRQ9UHK6 382 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 NEUROG3Q9Y4Z2 214 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 ARID1BQ8NFD5 2236 aaPredicted RBP8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 PLXNB3Q9ULL4 1909 aa8.03□□□□□ -1.12
CHMP2A-205ENST00000600006 TTC24A2A3L6 582 aaPredicted RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 ENC1O14682 589 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 APOL1O14791 398 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 MATN3O15232 486 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 KRT86O43790 486 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 SPOPO43791 374 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 FZD6O60353 706 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 PGLSO95336 258 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 CPP00450 1065 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 CSF2P04141 144 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 GIMD1P0DJR0 217 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 GM2AP17900 193 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 SPINK2P20155 84 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 COMTP21964 271 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 DGKAP23743 735 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 LIG3P49916 1009 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 YPEL5P62699 121 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 POLR2LP62875 67 aaKnown RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 PPIDQ08752 370 aaKnown RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 KIF5AQ12840 1032 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 SLC10A2Q12908 348 aaPredicted RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 PDE1CQ14123 709 aaPredicted RBP8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 TAZQ16635 292 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 WSCD2Q2TBF2 565 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 MACC1Q6ZN28 852 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 SLCO6A1Q86UG4 719 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 CCDC13Q8IYE1 715 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 SLC25A45Q8N413 288 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 EID2Q8N6I1 236 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 PAF1Q8N7H5 531 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 PNPLA1Q8N8W4 532 aa8.02□□□□□ -1.13
CHMP2A-205ENST00000600006 ACRBPQ8NEB7 543 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms