RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 FAM186AA6NE01 2351 aa20.27■□□□□ 0.83
IRF3-221ENST00000598808 UPK3BL1B0FP48 263 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 UPK3BL2E5RIL1 263 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 SOCS5O75159 536 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 RETP07949 1114 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 TAS2R38P59533 333 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 SEMG2Q02383 582 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 NIPAL4Q0D2K0 466 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 SNX1Q13596 522 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 TEX44Q53QW1 395 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 ARMC12Q5T9G4 340 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 PID1Q7Z2X4 250 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 CNTD1Q8N815 330 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 C1orf54Q8WWF1 131 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 KLK6Q92876 244 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 RAB7BQ96AH8 199 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 BIRC7Q96CA5 298 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 LOXL4Q96JB6 756 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 RBM15Q96T37 977 aaKnown RBP eCLIP20.26■□□□□ 0.83
IRF3-221ENST00000598808 DKK3Q9UBP4 350 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 RSPH14Q9UHP6 348 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 EIF2B4Q9UI10 523 aaKnown RBP20.26■□□□□ 0.83
IRF3-221ENST00000598808 GGT7Q9UJ14 662 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.26■□□□□ 0.83
IRF3-221ENST00000598808 PCDHB9Q9Y5E1 797 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 GPR179Q6PRD1 2367 aa20.26■□□□□ 0.83
IRF3-221ENST00000598808 A0A1W2PQU0 124 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 METTL12A8MUP2 240 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 TIMP2P16035 220 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 NFKB1P19838 968 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 CES1P23141 567 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 MPLP40238 635 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 EPHB1P54762 984 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 FAM193AP78312 1265 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 SPEM2Q0P670 501 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 WASHC5Q12768 1159 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 PCSK7Q16549 785 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 MAATS1Q7Z4T9 603 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 IFT20Q8IY31 132 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 ZCCHC9Q8N567 271 aaKnown RBP20.25■□□□□ 0.83
IRF3-221ENST00000598808 CXorf40AQ8TE69 158 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 NSMCE3Q96MG7 304 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 LRRC1Q9BTT6 524 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 WRAP53Q9BUR4 548 aaKnown RBP20.25■□□□□ 0.83
IRF3-221ENST00000598808 PCED1AQ9H1Q7 454 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 KDM4CQ9H3R0 1056 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 SMOC1Q9H4F8 434 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 GLOD4Q9HC38 313 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 PCDH12Q9NPG4 1184 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 FADS3Q9Y5Q0 445 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 OTOGLQ3ZCN5 2332 aa20.25■□□□□ 0.83
IRF3-221ENST00000598808 CFIP05156 583 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 ITIH2P19823 946 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 VSNL1P62760 191 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 POLR2LP62875 67 aaKnown RBP20.24■□□□□ 0.83
IRF3-221ENST00000598808 UGP2Q16851 508 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 KDELC2Q7Z4H8 507 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 PRPF39Q86UA1 669 aaKnown RBP20.24■□□□□ 0.83
IRF3-221ENST00000598808 ZSWIM9Q86XI8 627 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 ZNF567Q8N184 647 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 ARRDC2Q8TBH0 407 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 VOPP1Q96AW1 172 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 TEKT5Q96M29 485 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 VAT1Q99536 393 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 MYOCQ99972 504 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 SMARCAL1Q9NZC9 954 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 UBP1Q9NZI7 540 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 DNPEPQ9ULA0 475 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 BCLAF3A2AJT9 711 aaKnown RBP20.24■□□□□ 0.83
IRF3-221ENST00000598808 IGHV4-34P06331 123 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 GNSP15586 552 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 TNNT3P45378 269 aaPredicted RBP20.24■□□□□ 0.83
IRF3-221ENST00000598808 ELP6Q0PNE2 266 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 SEL1L3Q68CR1 1132 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 ALG1LQ6GMV1 187 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 ITPRIPL1Q6GPH6 555 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 SYT12Q8IV01 421 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 DCLK2Q8N568 766 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 FAM71DQ8N9W8 422 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 LPCAT1Q8NF37 534 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 FAM131CQ96AQ9 280 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 TMEM121Q9BTD3 319 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 SLC25A51Q9H1U9 297 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 CHKBQ9Y259 395 aa20.24■□□□□ 0.83
IRF3-221ENST00000598808 GVINP1Q7Z2Y8 2422 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 ZNF292O60281 2723 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 TSPAN11A1L157 253 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 A8MX80 341 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 TRAFD1O14545 582 aaPredicted RBP20.23■□□□□ 0.83
IRF3-221ENST00000598808 TSPAN6O43657 245 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 RRP9O43818 475 aaKnown RBP20.23■□□□□ 0.83
IRF3-221ENST00000598808 PMPCBO75439 489 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 PGLSO95336 258 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 CTPS1P17812 591 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 NFKBIAP25963 317 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 DPP6P42658 865 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 CCR5P51681 352 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 SKOR1P84550 965 aa20.23■□□□□ 0.83
IRF3-221ENST00000598808 SETMARQ53H47 684 aaPredicted RBP20.23■□□□□ 0.83
IRF3-221ENST00000598808 KIAA1161Q6NSJ0 714 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms