RNA–Protein interactions for RNA: ENST00000597209.1

CHMP2A-203, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-203ENST00000597209 IRF4Q15306 451 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 HADHQ16836 314 aaKnown RBP18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 WSCD2Q2TBF2 565 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 ZCCHC8Q6NZY4 707 aaKnown RBP18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 LRRC49Q8IUZ0 686 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 BTBD6Q96KE9 485 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 NRSN2Q9GZP1 204 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 CAAP1Q9H8G2 361 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 NCKIPSDQ9NZQ3 722 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 SPASTQ9UBP0 616 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 LCMT1Q9UIC8 334 aa18.06■□□□□ 0.48
CHMP2A-203ENST00000597209 LY6G6EA0A0G2JKS1 128 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 MUSKO15146 869 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 MAFKO60675 156 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 CR2P20023 1033 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 LIG3P49916 1009 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 SCNN1BP51168 640 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 CYP4F3Q08477 520 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 RALGPS1Q5JS13 557 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 KDM7AQ6ZMT4 941 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 PHACTR4Q8IZ21 702 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 DCBLD1Q8N8Z6 715 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 ZNF564Q8TBZ8 553 aaPredicted RBP18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 DNAJC7Q99615 494 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 UVRAGQ9P2Y5 699 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 APOBEC3BQ9UH17 382 aaKnown RBP18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 U3KQA8 63 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 LRRK1Q38SD2 2015 aa18.05■□□□□ 0.48
CHMP2A-203ENST00000597209 SOCS5O75159 536 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 NEBLO76041 1014 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 H2AFZP0C0S5 128 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 IL4RP24394 825 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 ARSEP51690 589 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 CDH6P55285 790 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 CLDN6P56747 220 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 RALGDSQ12967 914 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 ZNF235Q14590 738 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 RTP5Q14D33 572 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 SLC18A3Q16572 532 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 ASTE1Q2TB18 679 aaPredicted RBP18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 SPECC1LQ69YQ0 1117 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 H2AFVQ71UI9 128 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 DPPA4Q7L190 304 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 BBS5Q8N3I7 341 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 OR8K1Q8NGG5 319 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 LMX1AQ8TE12 382 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 NXPE2Q96DL1 559 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 NSMCE3Q96MG7 304 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 NUDCD1Q96RS6 583 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 CLCA2Q9UQC9 943 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 COQ6Q9Y2Z9 468 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 GOLGA4Q13439 2230 aaKnown RBP18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 WDFY3Q8IZQ1 3526 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 ANKRD36A6QL64 1941 aa18.04■□□□□ 0.48
CHMP2A-203ENST00000597209 SSU72P8A0A1W2PR75 194 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 HTRA2O43464 458 aaPredicted RBP18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 LZTS3O60299 673 aaPredicted RBP18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 PROSCO94903 275 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 MT-CO3P00414 261 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 BLKP51451 505 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 PPARDQ03181 441 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 MTM1Q13496 603 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 KRT81Q14533 505 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 CDCP2Q5VXM1 449 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 LIPIQ6XZB0 460 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 ATPAF2Q8N5M1 289 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 ATL2Q8NHH9 583 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 NSMCE1Q8WV22 266 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 IL12RB2Q99665 862 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 MGME1Q9BQP7 344 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 APOOQ9BUR5 198 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 SLC13A1Q9BZW2 595 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 CTTNBP2NLQ9P2B4 639 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 PNMA8BQ9ULN7 279 aaPredicted RBP18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 GPSM3Q9Y4H4 160 aa18.03■□□□□ 0.48
CHMP2A-203ENST00000597209 KNTC1P50748 2209 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 ZZEF1O43149 2961 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 LMO7DNF2Z398 122 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 OPA1O60313 960 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 GCATO75600 419 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 PRKCGP05129 697 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 HTR1BP28222 390 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 INPP5AQ14642 412 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 NFATC4Q14934 902 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 PDK2Q15119 407 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 FAXCQ5TGI0 409 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 MARC1Q5VT66 337 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 RBFAQ8N0V3 343 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 SDR16C5Q8N3Y7 309 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 PGBD5Q8N414 524 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 FSTL5Q8N475 847 aaPredicted RBP18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 TEX26Q8N6G2 289 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 CTNNBL1Q8WYA6 563 aaPredicted RBP18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 LRRC61Q9BV99 259 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 BOCQ9BWV1 1114 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 TCEAL2Q9H3H9 227 aaPredicted RBP18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 SCUBE2Q9NQ36 999 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 RAXQ9Y2V3 346 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 DMXL2Q8TDJ6 3036 aa18.02■□□□□ 0.48
CHMP2A-203ENST00000597209 CHD6Q8TD26 2715 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms