RNA–Protein interactions for RNA: ENST00000593283.5

CIRBP-244, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-244ENST00000593283 PGBD5Q8N414 524 aa17.85■□□□□ 0.45
CIRBP-244ENST00000593283 PAF1Q8N7H5 531 aa17.85■□□□□ 0.45
CIRBP-244ENST00000593283 ECHDC3Q96DC8 303 aa17.85■□□□□ 0.45
CIRBP-244ENST00000593283 ABHD10Q9NUJ1 306 aa17.85■□□□□ 0.45
CIRBP-244ENST00000593283 ZNHIT6Q9NWK9 470 aaKnown RBP17.85■□□□□ 0.45
CIRBP-244ENST00000593283 NLGN3Q9NZ94 848 aa17.85■□□□□ 0.45
CIRBP-244ENST00000593283 ZFYVE26Q68DK2 2539 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 RP1P56715 2156 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 TTC24A2A3L6 582 aaPredicted RBP17.84■□□□□ 0.45
CIRBP-244ENST00000593283 AKR1B10O60218 316 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 MAFKO60675 156 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 CAPNS1P04632 268 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 H2AFZP0C0S5 128 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 JUNDP17535 347 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 ACP1P24666 158 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 LIG3P49916 1009 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 TAS2R40P59535 323 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 DAB2P98082 770 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 NSUN2Q08J23 767 aaKnown RBP eCLIP17.84■□□□□ 0.45
CIRBP-244ENST00000593283 RALGDSQ12967 914 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 DPYSL3Q14195 570 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 WSCD2Q2TBF2 565 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 ATP13A4Q4VNC1 1196 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 HES3Q5TGS1 186 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 H2AFVQ71UI9 128 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 TMPRSS12Q86WS5 348 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 RBFAQ8N0V3 343 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 FAM71BQ8TC56 605 aa17.84■□□□□ 0.45
CIRBP-244ENST00000593283 PNMA8BQ9ULN7 279 aaPredicted RBP17.84■□□□□ 0.45
CIRBP-244ENST00000593283 SRRM3A6NNA2 597 aaPredicted RBP17.83■□□□□ 0.44
CIRBP-244ENST00000593283 TMEM110-MUSTN1A8MSY1 372 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 K7ESM1 405 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 TRAFD1O14545 582 aaPredicted RBP17.83■□□□□ 0.44
CIRBP-244ENST00000593283 SCAMP1O15126 338 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 TMEM253P0C7T8 217 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 ALPPL2P10696 532 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 CDK4P11802 303 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 IL4RP24394 825 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 HSPA9P38646 679 aaKnown RBP17.83■□□□□ 0.44
CIRBP-244ENST00000593283 ADKP55263 362 aaKnown RBP17.83■□□□□ 0.44
CIRBP-244ENST00000593283 ILKQ13418 452 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 CAMK2BQ13554 666 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 PTK2BQ14289 1009 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 LRRC14Q15048 493 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 NCBP2-AS2Q69YL0 99 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 MACC1Q6ZN28 852 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 PHACTR4Q8IZ21 702 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 MDM1Q8TC05 714 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 MGME1Q9BQP7 344 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 TCEAL2Q9H3H9 227 aaPredicted RBP17.83■□□□□ 0.44
CIRBP-244ENST00000593283 CCDC86Q9H6F5 360 aaKnown RBP17.83■□□□□ 0.44
CIRBP-244ENST00000593283 SPTLC3Q9NUV7 552 aa17.83■□□□□ 0.44
CIRBP-244ENST00000593283 APOBEC3BQ9UH17 382 aaKnown RBP17.83■□□□□ 0.44
CIRBP-244ENST00000593283 LY6G6EA0A0G2JKS1 128 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-244ENST00000593283 NEMP2A6NFY4 417 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 TAF4O00268 1085 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 AQP9O43315 295 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 LZTS3O60299 673 aaPredicted RBP17.82■□□□□ 0.44
CIRBP-244ENST00000593283 PCCBP05166 539 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 MYF5P13349 255 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 CR2P20023 1033 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 HNF1BP35680 557 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 MMP13P45452 471 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 MAXP61244 160 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 YPEL5P62699 121 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 TSR1Q2NL82 804 aaKnown RBP17.82■□□□□ 0.44
CIRBP-244ENST00000593283 DPPA4Q7L190 304 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 PROSER1Q86XN7 944 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 BBS5Q8N3I7 341 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 PCDH19Q8TAB3 1148 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 LMX1AQ8TE12 382 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 APOLD1Q96LR9 279 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 NUDCD1Q96RS6 583 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 CHP1Q99653 195 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 ZNF670Q9BS34 389 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 NOD2Q9HC29 1040 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 SCUBE2Q9NQ36 999 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 U3KQA8 63 aa17.82■□□□□ 0.44
CIRBP-244ENST00000593283 TOR1BO14657 336 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 HTRA2O43464 458 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-244ENST00000593283 SOCS5O75159 536 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 MAP3K6O95382 1288 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 ELFN1P0C7U0 828 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 CKMT1AP12532 417 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 MAN1A1P33908 653 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 GALNT2Q10471 571 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 AGERQ15109 404 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 DEFB133Q30KQ1 61 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 KCTD6Q8NC69 237 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 NSMCE1Q8WV22 266 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 LRRC61Q9BV99 259 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 DUSP23Q9BVJ7 150 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 NHEJ1Q9H9Q4 299 aaPredicted RBP17.81■□□□□ 0.44
CIRBP-244ENST00000593283 B4GALT6Q9UBX8 382 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 LCMT1Q9UIC8 334 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 PCDHGC4Q9Y5F7 938 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 CSNK1G3Q9Y6M4 447 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 WDFY3Q8IZQ1 3526 aa17.81■□□□□ 0.44
CIRBP-244ENST00000593283 URB1O60287 2271 aaKnown RBP17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms