RNA–Protein interactions for RNA: ENST00000593254.1

H3F3B-213, Transcript of H3 histone family member 3B, humanhuman

TSL 5

Gene H3F3B, Length 894 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-213ENST00000593254 SERPING1P05155 500 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 GIMD1P0DJR0 217 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 TIMP2P16035 220 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 PTMSP20962 102 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 IL1R2P27930 398 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 RABIFP47224 123 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 PAPOLAP51003 745 aaKnown RBP13.33□□□□□ -0.28
H3F3B-213ENST00000593254 ERVPABLB-1P60509 514 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 SRSF1Q07955 248 aaKnown RBP eCLIP13.33□□□□□ -0.28
H3F3B-213ENST00000593254 ZNF211Q13398 564 aaPredicted RBP13.33□□□□□ -0.28
H3F3B-213ENST00000593254 DPYSQ14117 519 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 FZD2Q14332 565 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 GRM3Q14832 879 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 DPYSL2Q16555 572 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 LRRC73Q5JTD7 316 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 VPS36Q86VN1 386 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 PARGQ86W56 976 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 LSMEM2Q8N112 164 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 NPWQ8N729 165 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 OR4C6Q8NH72 309 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 HCAR2Q8TDS4 363 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 CENPTQ96BT3 561 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 CAAP1Q9H8G2 361 aa13.33□□□□□ -0.28
H3F3B-213ENST00000593254 CWC15Q9P013 229 aaKnown RBP13.33□□□□□ -0.28
H3F3B-213ENST00000593254 COL27A1Q8IZC6 1860 aaPredicted RBP13.32□□□□□ -0.28
H3F3B-213ENST00000593254 SLC28A2O43868 658 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 GYPCP04921 128 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 MPOP05164 745 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 NME1P15531 152 aaKnown RBP13.32□□□□□ -0.28
H3F3B-213ENST00000593254 TCF4P15884 667 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 RGRP47804 291 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 LSSP48449 732 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 CSNK1DP48730 415 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 SUOXP51687 545 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 PFN3P60673 137 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 HNRNPKP61978 463 aaKnown RBP eCLIP13.32□□□□□ -0.28
H3F3B-213ENST00000593254 GABREP78334 506 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 VAC14Q08AM6 782 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 ZSCAN23Q3MJ62 389 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 TPRG1LQ5T0D9 272 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 LURAP1LQ8IV03 231 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 CXorf40AQ8TE69 158 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 CPLX3Q8WVH0 158 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 KCNE4Q8WWG9 221 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 ZNF641Q96N77 438 aaPredicted RBP13.32□□□□□ -0.28
H3F3B-213ENST00000593254 TUBGCP5Q96RT8 1024 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.32□□□□□ -0.28
H3F3B-213ENST00000593254 DPH1Q9BZG8 443 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 THAP2Q9H0W7 228 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 SUV39H2Q9H5I1 410 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 ZWILCHQ9H900 591 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 ASCL3Q9NQ33 180 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 DNAJC28Q9NX36 388 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 IFNKQ9P0W0 207 aa13.32□□□□□ -0.28
H3F3B-213ENST00000593254 LUC7L2Q9Y383 392 aaKnown RBP13.32□□□□□ -0.28
H3F3B-213ENST00000593254 KIF26BQ2KJY2 2108 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 UNC79Q9P2D8 2635 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 LRP4O75096 1905 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 A0A087X0T9 212 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 KLK10O43240 276 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 BUB1BO60566 1050 aaPredicted RBP13.31□□□□□ -0.28
H3F3B-213ENST00000593254 MMP20O60882 483 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 PALMO75781 387 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 TM7SF2O76062 418 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 CSF2P04141 144 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 FAM228BP0C875 321 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 ITIH2P19823 946 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 IGFALSP35858 605 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 CSRP3P50461 194 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 IL10RBQ08334 325 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 ELP6Q0PNE2 266 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 PDE1CQ14123 709 aaPredicted RBP13.31□□□□□ -0.28
H3F3B-213ENST00000593254 PIGHQ14442 188 aaPredicted RBP13.31□□□□□ -0.28
H3F3B-213ENST00000593254 UGP2Q16851 508 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 SMTNL2Q2TAL5 461 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 TMEM52BQ4KMG9 183 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 BOLA3Q53S33 107 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 HS1BP3Q53T59 392 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 ZNF542PQ5EBM4 170 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 BRAT1Q6PJG6 821 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 IGF2-ASQ6U949 168 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 ARHGAP36Q6ZRI8 547 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 LZTR1Q8N653 840 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 NIPA2Q8N8Q9 360 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 TSEN2Q8NCE0 465 aaKnown RBP13.31□□□□□ -0.28
H3F3B-213ENST00000593254 POLR1BQ9H9Y6 1135 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 SP110Q9HB58 689 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 NLGN3Q9NZ94 848 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 IPO11Q9UI26 975 aaKnown RBP13.31□□□□□ -0.28
H3F3B-213ENST00000593254 KLF15Q9UIH9 416 aa13.31□□□□□ -0.28
H3F3B-213ENST00000593254 USP9XQ93008 2570 aaPredicted RBP13.31□□□□□ -0.28
H3F3B-213ENST00000593254 NEMP2A6NFY4 417 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 H3BRJ5 948 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 K7ENP7 123 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 DFFAO00273 331 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 SCAMP1O15126 338 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 FFAR2O15552 330 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 LZTS3O60299 673 aaPredicted RBP13.3□□□□□ -0.28
H3F3B-213ENST00000593254 OPA1O60313 960 aa13.3□□□□□ -0.28
H3F3B-213ENST00000593254 USP12O75317 370 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms