RNA–Protein interactions for RNA: ENST00000593089.1

TRIM47-207, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 392 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-207ENST00000593089 PARVAQ9NVD7 372 aa20.64■□□□□ 0.89
TRIM47-207ENST00000593089 DONSONQ9NYP3 566 aa20.64■□□□□ 0.89
TRIM47-207ENST00000593089 SIRPGQ9P1W8 387 aa20.64■□□□□ 0.89
TRIM47-207ENST00000593089 GULP1Q9UBP9 304 aa20.64■□□□□ 0.89
TRIM47-207ENST00000593089 PCSK1NQ9UHG2 260 aa20.64■□□□□ 0.89
TRIM47-207ENST00000593089 PADI4Q9UM07 663 aa20.64■□□□□ 0.89
TRIM47-207ENST00000593089 LRP4O75096 1905 aa20.64■□□□□ 0.89
TRIM47-207ENST00000593089 ARHGAP42A6NI28 874 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 TMEM110-MUSTN1A8MSY1 372 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 TK2O00142 265 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 DAPK3O43293 454 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 TCEA3O75764 348 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 PCCBP05166 539 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 CTSEP14091 401 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 HTR1BP28222 390 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 RBMS1P29558 406 aaKnown RBP20.63■□□□□ 0.89
TRIM47-207ENST00000593089 LIG3P49916 1009 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 HK3P52790 923 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 C19orf57Q0VDD7 668 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 INPP5AQ14642 412 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 ELOCQ15369 112 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 ALG11Q2TAA5 492 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 BRAT1Q6PJG6 821 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 ZSWIM9Q86XI8 627 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 FSTL5Q8N475 847 aaPredicted RBP20.63■□□□□ 0.89
TRIM47-207ENST00000593089 TSEN2Q8NCE0 465 aaKnown RBP20.63■□□□□ 0.89
TRIM47-207ENST00000593089 PCDH19Q8TAB3 1148 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 SYT11Q9BT88 431 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 APOOQ9BUR5 198 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 SNRNP25Q9BV90 132 aaKnown RBP20.63■□□□□ 0.89
TRIM47-207ENST00000593089 CPNE5Q9HCH3 593 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 OR1A2Q9Y585 309 aa20.63■□□□□ 0.89
TRIM47-207ENST00000593089 KLK10O43240 276 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 TEX33O43247 280 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 PALMO75781 387 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 RASGRP1O95267 797 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 MMP12P39900 470 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 TMPRSS3P57727 454 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 SPIDRQ14159 915 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 NFATC4Q14934 902 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 ERMARDQ5T6L9 678 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 PLEKHA7Q6IQ23 1121 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 SRLQ86TD4 932 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 ARFGAP1Q8N6T3 406 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 KYQ8NBH2 561 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 SCG3Q8WXD2 468 aaKnown RBP20.62■□□□□ 0.89
TRIM47-207ENST00000593089 GRAMD1AQ96CP6 724 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 TUBGCP5Q96RT8 1024 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 PEBP4Q96S96 227 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 KCTD15Q96SI1 283 aaPredicted RBP20.62■□□□□ 0.89
TRIM47-207ENST00000593089 EDEM3Q9BZQ6 932 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 KLQ9UEF7 1012 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 ATP8A1Q9Y2Q0 1164 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 KIF26BQ2KJY2 2108 aa20.62■□□□□ 0.89
TRIM47-207ENST00000593089 PMS2P1A4D2B8 440 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 LRRC53A6NM62 1247 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 DFFAO00273 331 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 C1QL1O75973 258 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 ALPIP09923 528 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 ERCC2P18074 760 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 SERPINA4P29622 427 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 SRP54P61011 504 aaKnown RBP20.61■□□□□ 0.89
TRIM47-207ENST00000593089 PPP6R3Q5H9R7 873 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-207ENST00000593089 ARHGAP40Q5TG30 622 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 PPP1R2P3Q6NXS1 205 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 IGF2-ASQ6U949 168 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 RFX8Q6ZV50 586 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 PAF1Q8N7H5 531 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 ARL10Q8N8L6 244 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 WDR48Q8TAF3 677 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 PRR11Q96HE9 360 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-207ENST00000593089 SLC46A1Q96NT5 459 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 CINPQ9BW66 212 aaPredicted RBP20.61■□□□□ 0.89
TRIM47-207ENST00000593089 ATP13A3Q9H7F0 1226 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 SP110Q9HB58 689 aa20.61■□□□□ 0.89
TRIM47-207ENST00000593089 EIF3CLB5ME19 914 aaKnown RBP20.6■□□□□ 0.89
TRIM47-207ENST00000593089 GOLGA6L22H0YM25 854 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 CSNK1DP48730 415 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 PDX1P52945 283 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 UCNP55089 124 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 MTM1Q13496 603 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 ASIC2Q16515 512 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 CCDC183Q5T5S1 534 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 ARHGAP36Q6ZRI8 547 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 GKN2Q86XP6 184 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 ARHGAP12Q8IWW6 846 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 PLA2G15Q8NCC3 412 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 LSM14AQ8ND56 463 aaKnown RBP20.6■□□□□ 0.89
TRIM47-207ENST00000593089 ATL2Q8NHH9 583 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 WDR36Q8NI36 951 aaKnown RBP20.6■□□□□ 0.89
TRIM47-207ENST00000593089 CCDC74AQ96AQ1 378 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 PDXPQ96GD0 296 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 WDR92Q96MX6 357 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 EIF3CQ99613 913 aaKnown RBP20.6■□□□□ 0.89
TRIM47-207ENST00000593089 TRIM7Q9C029 511 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 RABGEF1Q9UJ41 708 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 MYO6Q9UM54 1294 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 GPR34Q9UPC5 381 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 PCDHGA8Q9Y5G5 932 aa20.6■□□□□ 0.89
TRIM47-207ENST00000593089 TMEM191CA6NGB0 347 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms