RNA–Protein interactions for RNA: ENST00000593053.1

PRKCSH-218, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-218ENST00000593053 SPASTQ9UBP0 616 aa13.19□□□□□ -0.3
PRKCSH-218ENST00000593053 SEPT3Q9UH03 358 aa13.19□□□□□ -0.3
PRKCSH-218ENST00000593053 PNMA8BQ9ULN7 279 aaPredicted RBP13.19□□□□□ -0.3
PRKCSH-218ENST00000593053 CLCA2Q9UQC9 943 aa13.19□□□□□ -0.3
PRKCSH-218ENST00000593053 GPSM3Q9Y4H4 160 aa13.19□□□□□ -0.3
PRKCSH-218ENST00000593053 U3KQA8 63 aa13.19□□□□□ -0.3
PRKCSH-218ENST00000593053 PTPRBP23467 1997 aa13.19□□□□□ -0.3
PRKCSH-218ENST00000593053 DSPP15924 2871 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 ANKRD11Q6UB99 2663 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 TTC24A2A3L6 582 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 MYO1FO00160 1098 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 TOR1BO14657 336 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 LZTS3O60299 673 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 OPA1O60313 960 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 GCATO75600 419 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 MT-CO3P00414 261 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 DUSP3P51452 185 aaPredicted RBP13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 SLC25A11Q02978 314 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 KRT81Q14533 505 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 ZNF235Q14590 738 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 PRRT3Q5FWE3 981 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 FAXCQ5TGI0 409 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 ZCCHC8Q6NZY4 707 aaKnown RBP13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 DCBLD1Q8N8Z6 715 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 ECHDC3Q96DC8 303 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 NSMCE3Q96MG7 304 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 ZNF599Q96NL3 588 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 IL12RB2Q99665 862 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 LRRC61Q9BV99 259 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 SLC13A1Q9BZW2 595 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 EVA1BQ9NVM1 165 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 AK5Q9Y6K8 562 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 TRPM6Q9BX84 2022 aa13.18□□□□□ -0.3
PRKCSH-218ENST00000593053 CPED1A4D0V7 1026 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 A8MX80 341 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 TRAFD1O14545 582 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 MAFKO60675 156 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 PEX11BO96011 259 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 PCCBP05166 539 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 TPM3P06753 285 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 GP1BAP07359 652 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 PEX5P50542 639 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 ADKP55263 362 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 CDH6P55285 790 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 POLR2LP62875 67 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 PPARDQ03181 441 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 RALGDSQ12967 914 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 INPP5AQ14642 412 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 CDKN3Q16667 212 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 HADHQ16836 314 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 CACTIN-AS1Q8N1I8 211 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 PGBD5Q8N414 524 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 ATPAF2Q8N5M1 289 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 ZNF564Q8TBZ8 553 aaPredicted RBP13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 IFI44Q8TCB0 444 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 HNRNPLLQ8WVV9 542 aaKnown RBP13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 APOOQ9BUR5 198 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 NRSN2Q9GZP1 204 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 USP29Q9HBJ7 922 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 SALL4Q9UJQ4 1053 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 NENFQ9UMX5 172 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 OR1A2Q9Y585 309 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.17□□□□□ -0.35e-8■■■■□ 23.6
PRKCSH-218ENST00000593053 CELSR3Q9NYQ7 3312 aa13.17□□□□□ -0.3
PRKCSH-218ENST00000593053 GOLGA4Q13439 2230 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 ARID1BQ8NFD5 2236 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 APC2O95996 2303 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 CFAP69A5D8W1 941 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 TMEM110-MUSTN1A8MSY1 372 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 LMO7DNF2Z398 122 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 TPP1O14773 563 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 RECQL5O94762 991 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 ANXA6P08133 673 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 CELA2BP08218 269 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 CD48P09326 243 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 ELFN1P0C7U0 828 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 TSHRP16473 764 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 HTR1BP28222 390 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 HNRNPH3P31942 346 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 SERPINB6P35237 376 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 GJC1P36383 396 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 HSPA9P38646 679 aaKnown RBP13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 MMRN1Q13201 1228 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 NFATC4Q14934 902 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 RTP5Q14D33 572 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 AGERQ15109 404 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 NR0B2Q15466 257 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 ALG11Q2TAA5 492 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 COL28A1Q2UY09 1125 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 SKOR2Q2VWA4 1001 aaPredicted RBP13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 CDCP2Q5VXM1 449 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 GUSBP11Q6P575 273 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 ENPP7Q6UWV6 458 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 LIPIQ6XZB0 460 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 DPPA4Q7L190 304 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 RD3Q7Z3Z2 195 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 CPNE8Q86YQ8 564 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 HID1Q8IV36 788 aa13.16□□□□□ -0.3
PRKCSH-218ENST00000593053 BBS5Q8N3I7 341 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms