RNA–Protein interactions for RNA: ENST00000592467.1

CIRBP-239, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-239ENST00000592467 ANKRD20A8PQ5CZ79 823 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 PARGQ86W56 976 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 PQLC3Q8N755 202 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 SLC35G2Q8TBE7 412 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 NUDCD1Q96RS6 583 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 ZNF670Q9BS34 389 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 DEF6Q9H4E7 631 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 ZNHIT6Q9NWK9 470 aaKnown RBP20.32■□□□□ 0.84
CIRBP-239ENST00000592467 ZMIZ1Q9ULJ6 1067 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 ZFHX4Q86UP3 3567 aa20.32■□□□□ 0.84
CIRBP-239ENST00000592467 MYLKQ15746 1914 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 LY6G6EA0A0G2JKS1 128 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 KRT37O76014 449 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 CKMT2P17540 419 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 ACP1P24666 158 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 SERPINB6P35237 376 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 SSR1P43307 286 aaKnown RBP20.31■□□□□ 0.84
CIRBP-239ENST00000592467 LIG3P49916 1009 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 IHHQ14623 411 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 PDK2Q15119 407 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 ATPAF2Q8N5M1 289 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 TC2NQ8N9U0 490 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 CCDC42Q96M95 316 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 NOD2Q9HC29 1040 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 DNAJC28Q9NX36 388 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 LCMT1Q9UIC8 334 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 U3KQA8 63 aa20.31■□□□□ 0.84
CIRBP-239ENST00000592467 CFAP69A5D8W1 941 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 AKR1B15C9JRZ8 316 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-239ENST00000592467 TOR1BO14657 336 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 SCAMP1O15126 338 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 RFPL3O75679 317 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 TPM1P09493 284 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 C1SP09871 688 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 XPAP23025 273 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-239ENST00000592467 GJC1P36383 396 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 HSPA9P38646 679 aaKnown RBP20.3■□□□□ 0.84
CIRBP-239ENST00000592467 GARSP41250 739 aaKnown RBP20.3■□□□□ 0.84
CIRBP-239ENST00000592467 CLDN6P56747 220 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 MAXP61244 160 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 HNRNPKP61978 463 aaKnown RBP eCLIP20.3■□□□□ 0.84
CIRBP-239ENST00000592467 YPEL5P62699 121 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 MESDQ14696 234 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 TCEAL1Q15170 157 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 ERAP2Q6P179 960 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 DPPA4Q7L190 304 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 CNGA4Q8IV77 575 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 ZNF548Q8NEK5 533 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-239ENST00000592467 RAPGEF5Q92565 580 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 MAML1Q92585 1016 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 TCEAL2Q9H3H9 227 aaPredicted RBP20.3■□□□□ 0.84
CIRBP-239ENST00000592467 PCDHGC4Q9Y5F7 938 aa20.3■□□□□ 0.84
CIRBP-239ENST00000592467 COL27A1Q8IZC6 1860 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-239ENST00000592467 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-239ENST00000592467 C3orf70A6NLC5 250 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-239ENST00000592467 TAF4O00268 1085 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 FFAR2O15552 330 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 NEBLO76041 1014 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 KRT7P08729 469 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 SLC10A2Q12908 348 aaPredicted RBP20.29■□□□□ 0.84
CIRBP-239ENST00000592467 TRAF2Q12933 501 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 ZNF235Q14590 738 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 CCDC157Q569K6 752 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 LIPIQ6XZB0 460 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 NYAP1Q6ZVC0 841 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 LRRC49Q8IUZ0 686 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 GALNT15Q8N3T1 639 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 KCTD6Q8NC69 237 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 FATE1Q969F0 183 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 C1QTNF7Q9BXJ2 289 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 NLGN3Q9NZ94 848 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 CFAP47Q6ZTR5 3102 aa20.29■□□□□ 0.84
CIRBP-239ENST00000592467 GOLGA4Q13439 2230 aaKnown RBP20.29■□□□□ 0.84
CIRBP-239ENST00000592467 FAM149AA5PLN7 773 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 K7ESM1 405 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 SOCS5O75159 536 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 MAP3K6O95382 1288 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 KDELR1P24390 212 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 MMP13P45452 471 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 GBE1Q04446 702 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 ILKQ13418 452 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 LRRC14Q15048 493 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 TSR1Q2NL82 804 aaKnown RBP20.28■□□□□ 0.84
CIRBP-239ENST00000592467 CFAP58Q5T655 872 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 MARC1Q5VT66 337 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 ALG1LQ6GMV1 187 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 MACC1Q6ZN28 852 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 TMPRSS12Q86WS5 348 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 RBFAQ8N0V3 343 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 CBARPQ8N350 705 aaPredicted RBP20.28■□□□□ 0.84
CIRBP-239ENST00000592467 FAM181AQ8N9Y4 354 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 PLA2G15Q8NCC3 412 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 ZCCHC14Q8WYQ9 949 aaKnown RBP20.28■□□□□ 0.84
CIRBP-239ENST00000592467 TSGA13Q96PP4 275 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 CSNK1G3Q9Y6M4 447 aa20.28■□□□□ 0.84
CIRBP-239ENST00000592467 TMEM110-MUSTN1A8MSY1 372 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 FZD6O60353 706 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 CKMT1AP12532 417 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 MYF5P13349 255 aa20.27■□□□□ 0.84
CIRBP-239ENST00000592467 JUNDP17535 347 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms