RNA–Protein interactions for RNA: ENST00000591534.5

BRCA1-226, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-226ENST00000591534 CHST14Q8NCH0 376 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 DENND6BQ8NEG7 585 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF548Q8NEK5 533 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF775Q96BV0 537 aaPredicted RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 HIC2Q96JB3 615 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 TBATAQ96M53 351 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 ERGIC2Q96RQ1 377 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 SLC13A1Q9BZW2 595 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 OSBPL2Q9H1P3 480 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 NDST4Q9H3R1 872 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 BRD7Q9NPI1 651 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 LUC7LQ9NQ29 371 aaKnown RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 MPP6Q9NZW5 540 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 GMPR2Q9P2T1 348 aaKnown RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 PPARGC1AQ9UBK2 798 aaKnown RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 MYO6Q9UM54 1294 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 ZFR2Q9UPR6 939 aaKnown RBP9.58□□□□□ -0.88
BRCA1-226ENST00000591534 PCDHB1Q9Y5F3 818 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 FADS3Q9Y5Q0 445 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 KALRNO60229 2985 aa9.58□□□□□ -0.88
BRCA1-226ENST00000591534 TMEM131Q92545 1883 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 CPED1A4D0V7 1026 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ZSCAN5CA6NGD5 496 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 FOXN3O00409 490 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 EIF1AYO14602 144 aaKnown RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 IPO7O95373 1038 aaKnown RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 POP4O95707 220 aaKnown RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 PRB1P04280 392 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 CDH5P33151 784 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 GABRB2P47870 512 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 MAPKAPK2P49137 400 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 KLK7P49862 253 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 BLKP51451 505 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 CCNHP51946 323 aaPredicted RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 SNRPD1P62314 119 aaKnown RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 YPEL5P62699 121 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 RAPGEF1Q13905 1077 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 FZD2Q14332 565 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 DBN1Q16643 649 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ISXQ2M1V0 245 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF805Q5CZA5 627 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF542PQ5EBM4 170 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 EFHC2Q5JST6 749 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ESRP1Q6NXG1 681 aaKnown RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF683Q8IZ20 524 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 SLC22A18ASQ8N1D0 253 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF843Q8N446 348 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 OR7D4Q8NG98 312 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 LMX1AQ8TE12 382 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 NAF1Q96HR8 494 aaKnown RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 BMFQ96LC9 184 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 TBCBQ99426 244 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 XPO4Q9C0E2 1151 aaKnown RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ZDHHC6Q9H6R6 413 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 GPR27Q9NS67 375 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 TAB2Q9NYJ8 693 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 PCDHGA8Q9Y5G5 932 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 BZW2Q9Y6E2 419 aaKnown RBP9.57□□□□□ -0.88
BRCA1-226ENST00000591534 BPTFQ12830 3046 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 PLXNA2O75051 1894 aa9.57□□□□□ -0.88
BRCA1-226ENST00000591534 ASXL3Q9C0F0 2248 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 A0A1W2PQJ5 194 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 EME2A4GXA9 379 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-226ENST00000591534 POM121BA6NF01 834 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 IGLON5A6NGN9 336 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 C16orf96A6NNT2 1141 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 TMEM110-MUSTN1A8MSY1 372 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 GSRP00390 522 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 ANXA6P08133 673 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 GIMD1P0DJR0 217 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 PLA2G2AP14555 144 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 CYP11B1P15538 503 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 DESP17661 470 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 XPAP23025 273 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-226ENST00000591534 SUOXP51687 545 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 CDKN3Q16667 212 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 ARHGAP40Q5TG30 622 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 RWDD4Q6NW29 188 aaKnown RBP9.56□□□□□ -0.88
BRCA1-226ENST00000591534 EFL1Q7Z2Z2 1120 aaKnown RBP9.56□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF438Q7Z4V0 828 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 TTC7BQ86TV6 843 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 VPS36Q86VN1 386 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 NLRP8Q86W28 1048 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 ZNF677Q86XU0 584 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 XYLT1Q86Y38 959 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 VSTM4Q8IW00 320 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 SDR16C5Q8N3Y7 309 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 FSTL5Q8N475 847 aaPredicted RBP9.56□□□□□ -0.88
BRCA1-226ENST00000591534 NEK11Q8NG66 645 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 OR6C4Q8NGE1 309 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 ATL2Q8NHH9 583 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 WDR36Q8NI36 951 aaKnown RBP9.56□□□□□ -0.88
BRCA1-226ENST00000591534 CXorf40AQ8TE69 158 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 CASKIN2Q8WXE0 1202 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 SLC46A1Q96NT5 459 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 MAGEH1Q9H213 219 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 HSD3B7Q9H2F3 369 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 PLCB1Q9NQ66 1216 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 DONSONQ9NYP3 566 aa9.56□□□□□ -0.88
BRCA1-226ENST00000591534 OR12D3Q9UGF7 316 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms