RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 RAB7BQ96AH8 199 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 BMFQ96LC9 184 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 ZNF641Q96N77 438 aaPredicted RBP11.61□□□□□ -0.55
VMP1-211ENST00000591315 TUBGCP5Q96RT8 1024 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 IL12RB2Q99665 862 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 C1QTNF2Q9BXJ5 285 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 BRD8Q9H0E9 1235 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 MBNL1Q9NR56 388 aaKnown RBP11.61□□□□□ -0.55
VMP1-211ENST00000591315 SEPT10Q9P0V9 454 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 GUCA1BQ9UMX6 200 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 ATP8A1Q9Y2Q0 1164 aa11.61□□□□□ -0.55
VMP1-211ENST00000591315 TCRBV7S2A1N4TA0A589 114 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 F5H423 210 aaPredicted RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 PRAMEF26H0Y7S4 382 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 TLR4O00206 839 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 HTRA2O43464 458 aaPredicted RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 TSPAN6O43657 245 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 ZFXP17010 805 aaPredicted RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 CTPS1P17812 591 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 GM2AP17900 193 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 HNRNPA2B1P22626 353 aaKnown RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 XPAP23025 273 aaPredicted RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 HSPA9P38646 679 aaKnown RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 MMP12P39900 470 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 LIG3P49916 1009 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 C21orf59P57076 290 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 NXPH1P58417 271 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 FAM193AP78312 1265 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 IFI35P80217 286 aaPredicted RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 TFDP2Q14188 446 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 PDK1Q15118 436 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 PRKD1Q15139 912 aaPredicted RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 TEAD4Q15561 434 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 PPP2R5EQ16537 467 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 TMEM52BQ4KMG9 183 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 CFAP58Q5T655 872 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 KIAA1161Q6NSJ0 714 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 TIGD7Q6NT04 549 aaPredicted RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 RFLNAQ6ZTI6 216 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 NYAP1Q6ZVC0 841 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 PEX26Q7Z412 305 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 ZC3H18Q86VM9 953 aaKnown RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 SLC22A18ASQ8N1D0 253 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 MFSD2AQ8NA29 543 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 OR13H1Q8NG92 308 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 FUBP1Q96AE4 644 aaKnown RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 AGAP3Q96P47 875 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 RTKNQ9BST9 563 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 OSBPL8Q9BZF1 889 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 LZTFL1Q9NQ48 299 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 DNAAF2Q9NVR5 837 aaKnown RBP11.6□□□□□ -0.55
VMP1-211ENST00000591315 B4GALT6Q9UBX8 382 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 AMFRQ9UKV5 643 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 DMTF1Q9Y222 760 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 PCDHB9Q9Y5E1 797 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 RAI2Q9Y5P3 530 aa11.6□□□□□ -0.55
VMP1-211ENST00000591315 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.59□□□□□ -0.55
VMP1-211ENST00000591315 SH3BP5O60239 455 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 OPHN1O60890 802 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 PGLSO95336 258 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 PRLP01236 227 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 ALPIP09923 528 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 THEGLP0DJG4 465 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 C6P13671 934 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 PTPN3P26045 913 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 AKT2P31751 481 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 IGFALSP35858 605 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 CD86P42081 329 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 RWDD2BP57060 319 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 WASHC5Q12768 1159 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 SGCGQ13326 291 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 STAT4Q14765 748 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 GRM3Q14832 879 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 ZNF423Q2M1K9 1284 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 ZNF542PQ5EBM4 170 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 BRAT1Q6PJG6 821 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 Q6ZSR6 202 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 BBS12Q6ZW61 710 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 DGLUCYQ7Z3D6 616 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 TSPAN33Q86UF1 283 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 GATAD2AQ86YP4 633 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 PELI3Q8N2H9 469 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 BBS5Q8N3I7 341 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 PAF1Q8N7H5 531 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 CCDC112Q8NEF3 446 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 HCAR2Q8TDS4 363 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 CXorf40AQ8TE69 158 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 PIH1D2Q8WWB5 315 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 FATE1Q969F0 183 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 CENPTQ96BT3 561 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 KLHDC7BQ96G42 594 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 RBM41Q96IZ5 413 aaKnown RBP11.59□□□□□ -0.55
VMP1-211ENST00000591315 ZDHHC5Q9C0B5 715 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 POLR1EQ9GZS1 481 aaKnown RBP11.59□□□□□ -0.55
VMP1-211ENST00000591315 KCNF1Q9H3M0 494 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 TM7SF3Q9NS93 570 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 CHKBQ9Y259 395 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 BTBD3Q9Y2F9 522 aa11.59□□□□□ -0.55
VMP1-211ENST00000591315 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.59□□□□□ -0.55
VMP1-211ENST00000591315 CEP295Q9C0D2 2601 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms