RNA–Protein interactions for RNA: ENST00000591275.5

DDX39A-216, Transcript of DExD-box helicase 39A, humanhuman

TSL 2

Gene DDX39A, Length 484 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-216ENST00000591275 NEU3Q9UQ49 428 aa16.06■□□□□ 0.16
DDX39A-216ENST00000591275 PCDHB11Q9Y5F2 797 aa16.06■□□□□ 0.16
DDX39A-216ENST00000591275 RNF215Q9Y6U7 377 aa16.06■□□□□ 0.16
DDX39A-216ENST00000591275 SPTAN1Q13813 2472 aaKnown RBP16.06■□□□□ 0.16
DDX39A-216ENST00000591275 USP9YO00507 2555 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-216ENST00000591275 C9orf172C9J069 976 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 KDELR3O43731 214 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 LRIG2O94898 1065 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 PIGNO95427 931 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 IGSF6O95976 241 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 PCCBP05166 539 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 CYP11B1P15538 503 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 MTIF2P46199 727 aaKnown RBP16.05■□□□□ 0.16
DDX39A-216ENST00000591275 RHOAP61586 193 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 TMEM52BQ4KMG9 183 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 CERCAMQ5T4B2 595 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 SPRED1Q7Z699 444 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 PHLDB2Q86SQ0 1253 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 IRF2BP1Q8IU81 584 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 FAM46DQ8NEK8 389 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 CPA5Q8WXQ8 436 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 EXOC2Q96KP1 924 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 WDR92Q96MX6 357 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 RBM15Q96T37 977 aaKnown RBP eCLIP16.05■□□□□ 0.166e-8■■■■■ 29.9
DDX39A-216ENST00000591275 FUCA2Q9BTY2 467 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 KLC2Q9H0B6 622 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 DKK3Q9UBP4 350 aa16.05■□□□□ 0.16
DDX39A-216ENST00000591275 ARHGEF17Q96PE2 2063 aaPredicted RBP16.05■□□□□ 0.16
DDX39A-216ENST00000591275 SDK2Q58EX2 2172 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 ZFC3H1O60293 1989 aaKnown RBP16.04■□□□□ 0.16
DDX39A-216ENST00000591275 RELNP78509 3460 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 B4DGG1 531 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 TNFP01375 233 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 GLB1P16278 677 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 NRG1Q02297 640 aaPredicted RBP16.04■□□□□ 0.16
DDX39A-216ENST00000591275 NAA35Q5VZE5 725 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 TAF8Q7Z7C8 310 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 DTX1Q86Y01 620 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 PTRH1Q86Y79 214 aaKnown RBP16.04■□□□□ 0.16
DDX39A-216ENST00000591275 LURAP1LQ8IV03 231 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 SLITRK4Q8IW52 837 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 PLA2G15Q8NCC3 412 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 OR1E3Q8WZA6 343 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 TBC1D31Q96DN5 1066 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 HMCESQ96FZ2 354 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 CMKLR1Q99788 373 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 NCAPGQ9BPX3 1015 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 SLC25A18Q9H1K4 315 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 SEMA6CQ9H3T2 930 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 PCDH12Q9NPG4 1184 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 LRIT1Q9P2V4 623 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 RWDD2AQ9UIY3 292 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 APPL1Q9UKG1 709 aa16.04■□□□□ 0.16
DDX39A-216ENST00000591275 A0A1W2PQC6 194 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 PRKCGP05129 697 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 PLEKP08567 350 aaPredicted RBP16.03■□□□□ 0.16
DDX39A-216ENST00000591275 LIG3P49916 1009 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 ELP6Q0PNE2 266 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 ARHGEF7Q14155 803 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 C16orf72Q14CZ0 275 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 CCDC14Q49A88 953 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 MAP9Q49MG5 647 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 NOP9Q86U38 636 aaKnown RBP16.03■□□□□ 0.16
DDX39A-216ENST00000591275 CCDC185Q8N715 623 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 MSANTD4Q8NCY6 345 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 ATL2Q8NHH9 583 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 GPT2Q8TD30 523 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 RXFP2Q8WXD0 754 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 TMEM159Q96B96 161 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 NOL6Q9H6R4 1146 aaKnown RBP16.03■□□□□ 0.16
DDX39A-216ENST00000591275 RDH14Q9HBH5 336 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 FGF22Q9HCT0 170 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 MRPL40Q9NQ50 206 aaKnown RBP16.03■□□□□ 0.16
DDX39A-216ENST00000591275 GEMIN8Q9NWZ8 242 aaKnown RBP16.03■□□□□ 0.16
DDX39A-216ENST00000591275 MFHAS1Q9Y4C4 1052 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 FHOD1Q9Y613 1164 aa16.03■□□□□ 0.16
DDX39A-216ENST00000591275 TMEM202A6NGA9 273 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 ZSCAN5CA6NGD5 496 aaPredicted RBP16.02■□□□□ 0.16
DDX39A-216ENST00000591275 LSM8O95777 96 aaKnown RBP16.02■□□□□ 0.16
DDX39A-216ENST00000591275 MMEP08473 750 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 CCL4P13236 92 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 SDC4P31431 198 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 NOMO3P69849 1222 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 MTM1Q13496 603 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 UGP2Q16851 508 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 AMZ1Q400G9 498 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 C14orf28Q4W4Y0 310 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 DPY19L2P1Q6NXN4 242 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 OGFOD3Q6PK18 319 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 ARCQ7LC44 396 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 CCL4L1Q8NHW4 92 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 JOSD2Q8TAC2 188 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 TMEM168Q9H0V1 697 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 DPEP2Q9H4A9 486 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 RETREG1Q9H6L5 497 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 ANKMY1Q9P2S6 941 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 LHX3Q9UBR4 397 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 DAAM1Q9Y4D1 1078 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 DGKBQ9Y6T7 804 aa16.02■□□□□ 0.16
DDX39A-216ENST00000591275 USP9XQ93008 2570 aaPredicted RBP16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms