RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, human

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-223	ENST00000591239	VAV2	P52735	878 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	NAP1L1	P55209	391 aa	Known RBP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	ITK	Q08881	620 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	SHB	Q15464	509 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	TAZ	Q16635	292 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	TMEM52B	Q4KMG9	183 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	RALGPS1	Q5JS13	557 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	MFSD7	Q6UXD7	560 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	NPNT	Q6UXI9	565 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	GCNT7	Q6ZNI0	430 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239		Q6ZSR6	202 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	PTAR1	Q7Z6K3	402 aa	Predicted RBP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	KIAA1328	Q86T90	577 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	RFX6	Q8HWS3	928 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	OXR1	Q8N573	874 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	FAM174A	Q8TBP5	190 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	SETD7	Q8WTS6	366 aa	Known RBP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	PDCD6IP	Q8WUM4	868 aa	Known RBP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	LRRN4	Q8WUT4	740 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	CENPT	Q96BT3	561 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	CALR3	Q96L12	384 aa	Known RBP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	ZNF830	Q96NB3	372 aa	Predicted RBP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	LGMN	Q99538	433 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	KLF6	Q99612	283 aa	Predicted RBP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	C1QTNF7	Q9BXJ2	289 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	POLR1E	Q9GZS1	481 aa	Known RBP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	RBM22	Q9NW64	420 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	AMACR	Q9UHK6	382 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	PCOLCE2	Q9UKZ9	415 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	ATP8A1	Q9Y2Q0	1164 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	PCDHB9	Q9Y5E1	797 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	WDFY3	Q8IZQ1	3526 aa		9.26	□□□□□ -0.93
DNMT1-223	ENST00000591239	SPAAR	A0A1B0GVQ0	90 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239		A0A1W2PQ67	120 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	KCNK1	O00180	336 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	FPGT	O14772	594 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	YKT6	O15498	198 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	NEBL	O76041	1014 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	ITGAV	P06756	1048 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	KRT10	P13645	584 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	C6	P13671	934 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	CES1	P23141	567 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	GRK6	P43250	576 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	RABIF	P47224	123 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	MARCKSL1	P49006	195 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	NR2C2	P49116	596 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	LIG3	P49916	1009 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	DYNLT1	P63172	113 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	FAM193A	P78312	1265 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	SIM1	P81133	766 aa	Predicted RBP	9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	SEMG2	Q02383	582 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	PPID	Q08752	370 aa	Known RBP	9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	TFDP2	Q14188	446 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	PDK1	Q15118	436 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	LLGL1	Q15334	1064 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	TRIP6	Q15654	476 aa	Known RBP	9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	TFDP3	Q5H9I0	405 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	KAZN	Q674X7	775 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	ALG1L	Q6GMV1	187 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	KYAT3	Q6YP21	454 aa	Known RBP	9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	SPOCD1	Q6ZMY3	1216 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	GATAD2A	Q86YP4	633 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	DCP2	Q8IU60	420 aa	Known RBP	9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	CCDC13	Q8IYE1	715 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	KATNAL2	Q8IYT4	538 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	RCOR2	Q8IZ40	523 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	SLC22A18AS	Q8N1D0	253 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	ZC3H8	Q8N5P1	291 aa	Known RBP eCLIP	9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	DENND6B	Q8NEG7	585 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	KIAA1524	Q8TCG1	905 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	RHBDD1	Q8TEB9	315 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	KRT35	Q92764	455 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	SEMA3C	Q99985	751 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	HAUS2	Q9NVX0	235 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	BTBD3	Q9Y2F9	522 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	COQ6	Q9Y2Z9	468 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	TTLL3	Q9Y4R7	772 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	ANKRD36	A6QL64	1941 aa		9.25	□□□□□ -0.93
DNMT1-223	ENST00000591239	TP53BP1	Q12888	1972 aa	Predicted RBP	9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	CFAP69	A5D8W1	941 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239		A8MX80	341 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	PPP1R12A	O14974	1030 aa	Predicted RBP	9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	LZTS3	O60299	673 aa	Predicted RBP	9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	CST8	O60676	142 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	PGLS	O95336	258 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	CP	P00450	1065 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	JCHAIN	P01591	159 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	HLA-DQB2	P05538	268 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	ELFN1	P0C7U0	828 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	EPHA8	P29322	1005 aa	Predicted RBP	9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	CTNNA1	P35221	906 aa	Known RBP	9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	IGFALS	P35858	605 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	GSDMD	P57764	484 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	PFN3	P60673	137 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	DSC2	Q02487	901 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	ADCY2	Q08462	1091 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	AP1B1	Q10567	949 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	KIF5A	Q12840	1032 aa		9.24	□□□□□ -0.93
DNMT1-223	ENST00000591239	TRAF2	Q12933	501 aa		9.24	□□□□□ -0.93

Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms