RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 LLGL1Q15334 1064 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 KIF19Q2TAC6 998 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 LRRC73Q5JTD7 316 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 ZSWIM9Q86XI8 627 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 FAM174AQ8TBP5 190 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 CXorf40AQ8TE69 158 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 LRRN4Q8WUT4 740 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 TFB1MQ8WVM0 346 aaKnown RBP11.99□□□□□ -0.49
LIG3-213ENST00000590630 HES6Q96HZ4 224 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 NSMCE3Q96MG7 304 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 IL12RB2Q99665 862 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 C1QTNF7Q9BXJ2 289 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 HEMGNQ9BXL5 484 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 OSBPL8Q9BZF1 889 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 DNAAF2Q9NVR5 837 aaKnown RBP11.99□□□□□ -0.49
LIG3-213ENST00000590630 SAE1Q9UBE0 346 aaPredicted RBP11.99□□□□□ -0.49
LIG3-213ENST00000590630 TTLL3Q9Y4R7 772 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 PCDHGC4Q9Y5F7 938 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 PCNX2A6NKB5 2137 aa11.99□□□□□ -0.49
LIG3-213ENST00000590630 SPTBN2O15020 2390 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 IGLON5A6NGN9 336 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 WNT9AO14904 365 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 DFNA5O60443 496 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 OPHN1O60890 802 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 TM7SF2O76062 418 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 TJP3O95049 919 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 PAK4O96013 591 aaPredicted RBP11.98□□□□□ -0.49
LIG3-213ENST00000590630 JCHAINP01591 159 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 WNT1P04628 370 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 ZNF883P0CG24 379 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 PYGMP11217 842 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 CA4P22748 312 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 CTSKP43235 329 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 BNC1Q01954 994 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 TRAF2Q12933 501 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 ZBTB17Q13105 803 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 SLC14A1Q13336 389 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 XRCC4Q13426 336 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 FGL2Q14314 439 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 HLA-BQ31612 363 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 TMEM52BQ4KMG9 183 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 ARMC12Q5T9G4 340 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 CCDC181Q5TID7 509 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 LAYNQ6UX15 382 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 DENND6BQ8NEG7 585 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 PDCD6IPQ8WUM4 868 aaKnown RBP11.98□□□□□ -0.49
LIG3-213ENST00000590630 KLK6Q92876 244 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 LENG8Q96PV6 779 aaPredicted RBP11.98□□□□□ -0.49
LIG3-213ENST00000590630 ALS2CR12Q96Q35 445 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 WRAP53Q9BUR4 548 aaKnown RBP11.98□□□□□ -0.49
LIG3-213ENST00000590630 GAREM1Q9H706 876 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 LZTFL1Q9NQ48 299 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 PACSIN2Q9UNF0 486 aaPredicted RBP11.98□□□□□ -0.49
LIG3-213ENST00000590630 PCDHB9Q9Y5E1 797 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 SNX11Q9Y5W9 270 aa11.98□□□□□ -0.49
LIG3-213ENST00000590630 CFAP69A5D8W1 941 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 HACD1B0YJ81 288 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 TLR4O00206 839 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 TM4SF5O14894 197 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 DDX3YO15523 660 aaKnown RBP11.97□□□□□ -0.49
LIG3-213ENST00000590630 PGLSO95336 258 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 CPP00450 1065 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 ITIH2P19823 946 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 FAM193AP78312 1265 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 DSC2Q02487 901 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 NOMO1Q15155 1222 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 ZNF423Q2M1K9 1284 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 UAP1L1Q3KQV9 507 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 DPPA4Q7L190 304 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 ABI3BPQ7Z7G0 1075 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 ZC3H18Q86VM9 953 aaKnown RBP11.97□□□□□ -0.49
LIG3-213ENST00000590630 NDUFAF2Q8N183 169 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 CNTD1Q8N815 330 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 OR2I1PQ8NGU4 316 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 ARRDC2Q8TBH0 407 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 HAUS1Q96CS2 278 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 PDLIM2Q96JY6 352 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 QKIQ96PU8 341 aaKnown RBP eCLIP11.97□□□□□ -0.49
LIG3-213ENST00000590630 VAT1Q99536 393 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 ERVMER34-1Q9H9K5 563 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 FZD3Q9NPG1 666 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 GDF3Q9NR23 364 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 SEPT10Q9P0V9 454 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 PHTF1Q9UMS5 762 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 PPP2R2CQ9Y2T4 447 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 RAI2Q9Y5P3 530 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 HS3ST3A1Q9Y663 406 aa11.97□□□□□ -0.49
LIG3-213ENST00000590630 TDRD6O60522 2096 aaKnown RBP11.96□□□□□ -0.49
LIG3-213ENST00000590630 GOLGA6L9A6NEM1 432 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 A6NNZ2 444 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 FPGTO14772 594 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 FZD6O60353 706 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 MMP20O60882 483 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 ZNF189O75820 626 aaPredicted RBP11.96□□□□□ -0.49
LIG3-213ENST00000590630 PTMAP06454 111 aaKnown RBP11.96□□□□□ -0.49
LIG3-213ENST00000590630 ELFN1P0C7U0 828 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 C6P13671 934 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 PTPN3P26045 913 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 LIG3P49916 1009 aa11.96□□□□□ -0.49
LIG3-213ENST00000590630 NXPH1P58417 271 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms