RNA–Protein interactions for RNA: ENST00000589940.5

CXXC1-212, Transcript of CXXC finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene CXXC1, Length 2,242 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-212ENST00000589940 OGFRQ9NZT2 677 aa17.56■□□□□ 0.4
CXXC1-212ENST00000589940 MROH6A6NGR9 719 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 WASH3PC4AMC7 463 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 RPL26P61254 145 aaKnown RBP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 RASA2Q15283 850 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 GLIPR1L2Q4G1C9 344 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 AGBL2Q5U5Z8 902 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 LRRC6Q86X45 466 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 SFTPA1Q8IWL2 248 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 BRSK1Q8TDC3 778 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 UCMAQ8WVF2 138 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 KCNK12Q9HB15 430 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 PPANQ9NQ55 473 aaKnown RBP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 SMYD2Q9NRG4 433 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 TREX1Q9NSU2 369 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 BCCIPQ9P287 314 aaKnown RBP eCLIP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 CTNNAL1Q9UBT7 734 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 LGALS13Q9UHV8 139 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 RPL26L1Q9UNX3 145 aaKnown RBP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 CCDC78A2IDD5 438 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 PAPSS2O95340 614 aaPredicted RBP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 PRKCGP05129 697 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 OAS2P29728 719 aaKnown RBP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 MSH2P43246 934 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 GRIA4P48058 902 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 SOX9P48436 509 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 EPHB1P54762 984 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 SMAD2Q15796 467 aaKnown RBP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 QPCTQ16769 361 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 NUDT18Q6ZVK8 323 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 CTAGE3PQ8IX95 158 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 SLC44A1Q8WWI5 657 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 MRRFQ96E11 262 aaKnown RBP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 ZDHHC6Q9H6R6 413 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 PSMC3IPQ9P2W1 217 aaPredicted RBP17.55■□□□□ 0.4
CXXC1-212ENST00000589940 LIMD1Q9UGP4 676 aa17.55■□□□□ 0.4
CXXC1-212ENST00000589940 ANKRD36A6QL64 1941 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 CXorf49A8MYA2 514 aaPredicted RBP17.54■□□□□ 0.4
CXXC1-212ENST00000589940 HMGB1P1B2RPK0 211 aaPredicted RBP17.54■□□□□ 0.4
CXXC1-212ENST00000589940 LDB2O43679 373 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 APODP05090 189 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 PIRTP0C851 137 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 MGAT5Q09328 741 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 FNDC3BQ53EP0 1204 aaKnown RBP17.54■□□□□ 0.4
CXXC1-212ENST00000589940 TSTD2Q5T7W7 516 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 KCTD16Q68DU8 428 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 ESRP1Q6NXG1 681 aaKnown RBP17.54■□□□□ 0.4
CXXC1-212ENST00000589940 PPM1NQ8N819 430 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 CHST14Q8NCH0 376 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 PIH1D2Q8WWB5 315 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 CDKL2Q92772 493 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 ZNF641Q96N77 438 aaPredicted RBP17.54■□□□□ 0.4
CXXC1-212ENST00000589940 STMN4Q9H169 189 aaPredicted RBP17.54■□□□□ 0.4
CXXC1-212ENST00000589940 TRPV5Q9NQA5 729 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 IKBKGQ9Y6K9 419 aa17.54■□□□□ 0.4
CXXC1-212ENST00000589940 PAMP19021 973 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 BPTFQ12830 3046 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 MYLKQ15746 1914 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 LEXMQ3ZCV2 418 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 ADGRD1Q6QNK2 874 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 PTPRN2Q92932 1015 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 PEX13Q92968 403 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 ECHDC3Q96DC8 303 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 HEPHQ9BQS7 1158 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 SUV39H2Q9H5I1 410 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 IL1RAPL1Q9NZN1 696 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 SLC2A6Q9UGQ3 507 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 TBK1Q9UHD2 729 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 SPO11Q9Y5K1 396 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 CRTAMO95727 393 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 INHBAP08476 426 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 ERVK-10P10266 1014 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 SLC8A1P32418 973 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 NAB1Q13506 487 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 ZNF234Q14588 700 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 CNGA3Q16281 694 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 TNFAIP8L3Q5GJ75 292 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 PDPK2PQ6A1A2 396 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 KIAA0930Q6ICG6 404 aaPredicted RBP17.53■□□□□ 0.4
CXXC1-212ENST00000589940 KCNMB4Q86W47 210 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 SLC26A11Q86WA9 606 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 SUGP1Q8IWZ8 645 aaKnown RBP17.53■□□□□ 0.4
CXXC1-212ENST00000589940 SLC44A3Q8N4M1 653 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 PAF1Q8N7H5 531 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 DCAKDQ8WVC6 231 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 C20orf96Q9NUD7 363 aaPredicted RBP17.53■□□□□ 0.4
CXXC1-212ENST00000589940 ZFATQ9P243 1243 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 ARL5AQ9Y689 179 aa17.53■□□□□ 0.4
CXXC1-212ENST00000589940 UGT2B4P06133 528 aa17.52■□□□□ 0.4
CXXC1-212ENST00000589940 HNRNPA1L2Q32P51 320 aaKnown RBP17.52■□□□□ 0.4
CXXC1-212ENST00000589940 MARK2Q7KZI7 788 aaKnown RBP17.52■□□□□ 0.4
CXXC1-212ENST00000589940 GLT6D1Q7Z4J2 308 aa17.52■□□□□ 0.4
CXXC1-212ENST00000589940 RASSF3Q86WH2 238 aa17.52■□□□□ 0.4
CXXC1-212ENST00000589940 ZNF366Q8N895 744 aa17.52■□□□□ 0.4
CXXC1-212ENST00000589940 GRIN3AQ8TCU5 1115 aa17.52■□□□□ 0.4
CXXC1-212ENST00000589940 SPOCK2Q92563 424 aa17.52■□□□□ 0.4
CXXC1-212ENST00000589940 TLCD1Q96CP7 247 aa17.52■□□□□ 0.4
CXXC1-212ENST00000589940 P2RY13Q9BPV8 354 aa17.52■□□□□ 0.4
CXXC1-212ENST00000589940 TMEM245Q9H330 911 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms