RNA–Protein interactions for RNA: ENST00000589758.1

MBD1-220, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-220ENST00000589758 FGF11Q92914 225 aa14.48□□□□□ -0.09
MBD1-220ENST00000589758 PEBP4Q96S96 227 aa14.48□□□□□ -0.09
MBD1-220ENST00000589758 KCTD15Q96SI1 283 aaPredicted RBP14.48□□□□□ -0.09
MBD1-220ENST00000589758 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.48□□□□□ -0.09
MBD1-220ENST00000589758 TRIM7Q9C029 511 aa14.48□□□□□ -0.09
MBD1-220ENST00000589758 ISCUQ9H1K1 167 aa14.48□□□□□ -0.09
MBD1-220ENST00000589758 ZWILCHQ9H900 591 aa14.48□□□□□ -0.09
MBD1-220ENST00000589758 PCDH12Q9NPG4 1184 aa14.48□□□□□ -0.09
MBD1-220ENST00000589758 BZW2Q9Y6E2 419 aaKnown RBP14.48□□□□□ -0.09
MBD1-220ENST00000589758 ZZEF1O43149 2961 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 CPED1A4D0V7 1026 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 LMO7DNF2Z398 122 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 DFFAO00273 331 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 TLX3O43711 291 aaPredicted RBP14.47□□□□□ -0.09
MBD1-220ENST00000589758 LZTS3O60299 673 aaPredicted RBP14.47□□□□□ -0.09
MBD1-220ENST00000589758 BRINP1O60477 761 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 BUB1BO60566 1050 aaPredicted RBP14.47□□□□□ -0.09
MBD1-220ENST00000589758 LRCH4O75427 683 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 ANXA6P08133 673 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 MYF5P13349 255 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 C6P13671 934 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 PCK1P35558 622 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 RENBPP51606 427 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 ADKP55263 362 aaKnown RBP14.47□□□□□ -0.09
MBD1-220ENST00000589758 BCL2L1Q07817 233 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 CDKN3Q16667 212 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 WSCD2Q2TBF2 565 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 TBC1D25Q3MII6 688 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 SARM1Q6SZW1 724 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 EFL1Q7Z2Z2 1120 aaKnown RBP14.47□□□□□ -0.09
MBD1-220ENST00000589758 CAMK1DQ8IU85 385 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 RBFAQ8N0V3 343 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 SDR16C5Q8N3Y7 309 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 FSTL5Q8N475 847 aaPredicted RBP14.47□□□□□ -0.09
MBD1-220ENST00000589758 TSEN2Q8NCE0 465 aaKnown RBP14.47□□□□□ -0.09
MBD1-220ENST00000589758 ATL2Q8NHH9 583 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 WDR48Q8TAF3 677 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 NAT6Q93015 286 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 GRAMD1AQ96CP6 724 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 LRRC61Q9BV99 259 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 BOCQ9BWV1 1114 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 MYO1AQ9UBC5 1043 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 ATP8A1Q9Y2Q0 1164 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 COQ6Q9Y2Z9 468 aa14.47□□□□□ -0.09
MBD1-220ENST00000589758 FREM2Q5SZK8 3169 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 ANKRD11Q6UB99 2663 aaPredicted RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 ATRXP46100 2492 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 H3BRJ5 948 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 CSO75390 466 aaKnown RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 TPM1P09493 284 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 ALPIP09923 528 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 HOXB3P14651 431 aaPredicted RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 MMP12P39900 470 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 ARL4AP40617 200 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 RGRP47804 291 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 LIG3P49916 1009 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 AP1S1P61966 158 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 MTM1Q13496 603 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 C1orf61Q13536 156 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 TRIM14Q14142 442 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 BOLA3Q53S33 107 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 C6orf132Q5T0Z8 1188 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 TMCO4Q5TGY1 634 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 HGSNATQ68CP4 663 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 ESRP1Q6NXG1 681 aaKnown RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 GUSBP11Q6P575 273 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 LVRNQ6Q4G3 990 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 CYP4V2Q6ZWL3 525 aaPredicted RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 PAF1Q8N7H5 531 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 SCG3Q8WXD2 468 aaKnown RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 SYN2Q92777 582 aaPredicted RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 ECHDC3Q96DC8 303 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 ZNF578Q96N58 590 aaPredicted RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 ZNF599Q96NL3 588 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 PSKH2Q96QS6 385 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 APOOQ9BUR5 198 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 TCEAL2Q9H3H9 227 aaPredicted RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 CWC15Q9P013 229 aaKnown RBP14.46□□□□□ -0.09
MBD1-220ENST00000589758 SEPT3Q9UH03 358 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 DOLKQ9UPQ8 538 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 PCDHB1Q9Y5F3 818 aa14.46□□□□□ -0.09
MBD1-220ENST00000589758 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.45□□□□□ -0.1
MBD1-220ENST00000589758 A0A1W2PQ67 120 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 YY2O15391 372 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 USP12O75317 370 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 GCATO75600 419 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 TCEA3O75764 348 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 RASGRP1O95267 797 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 SERPING1P05155 500 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 CTSEP14091 401 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 TSHRP16473 764 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 LSSP48449 732 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 HK3P52790 923 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 COL9A2Q14055 689 aaPredicted RBP14.45□□□□□ -0.1
MBD1-220ENST00000589758 DPYSQ14117 519 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 PIGHQ14442 188 aaPredicted RBP14.45□□□□□ -0.1
MBD1-220ENST00000589758 INPP5AQ14642 412 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 LBRQ14739 615 aaKnown RBP14.45□□□□□ -0.1
MBD1-220ENST00000589758 NFATC4Q14934 902 aa14.45□□□□□ -0.1
MBD1-220ENST00000589758 ELOCQ15369 112 aa14.45□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms