RNA–Protein interactions for RNA: ENST00000589117.5

ZNF540-206, Transcript of zinc finger protein 540, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ZNF540, Length 2,349 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-206ENST00000589117 S100A14Q9HCY8 104 aa7.46□□□□□ -1.21
ZNF540-206ENST00000589117 SFMBT1Q9UHJ3 866 aa7.46□□□□□ -1.21
ZNF540-206ENST00000589117 CDH22Q9UJ99 828 aa7.46□□□□□ -1.21
ZNF540-206ENST00000589117 FBXO5Q9UKT4 447 aa7.46□□□□□ -1.21
ZNF540-206ENST00000589117 SCML2Q9UQR0 700 aa7.46□□□□□ -1.21
ZNF540-206ENST00000589117 SNX10Q9Y5X0 201 aa7.46□□□□□ -1.21
ZNF540-206ENST00000589117 TRIP12Q14669 1992 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 MYADML2A6NDP7 307 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 KCNU1A8MYU2 1149 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 PAPSS2O95340 614 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 PIGNO95427 931 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 MOCS2O96007 188 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 SLC35E2BP0CK96 405 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 CYBAP13498 195 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 RHOQP17081 205 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 HOXB8P17481 243 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 ATP5F1P24539 256 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 YY1P25490 414 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 ADRA1AP35348 466 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 PPARGP37231 505 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 SERPINH1P50454 418 aaKnown RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 PAPOLAP51003 745 aaKnown RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 DNAJB13P59910 316 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 CTBP1Q13363 440 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 ART3Q13508 389 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 SEPT6Q14141 434 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 CNGA3Q16281 694 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 VWA5B1Q5TIE3 1220 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 MANEALQ5VSG8 457 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 CST9Q5W186 159 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 NXNQ6DKJ4 435 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 ZNF470Q6ECI4 717 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 ANO7Q6IWH7 933 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 RGMBQ6NW40 437 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 ESRP1Q6NXG1 681 aaKnown RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 TMEM154Q6P9G4 183 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 PGM2L1Q6PCE3 622 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 FBXL19Q6PCT2 694 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 XKR5Q6UX68 686 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 NAPRTQ6XQN6 538 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 MAVSQ7Z434 540 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 BTLAQ7Z6A9 289 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 LRRTM3Q86VH5 581 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 ZNF354CQ86Y25 554 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 SLC22A9Q8IVM8 553 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 UMODL1-AS1Q8N2C9 162 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 CCNYL1Q8N7R7 359 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 C2CD4AQ8NCU7 369 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 OR10T2Q8NGX3 314 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 CEP70Q8NHQ1 597 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 FBXO27Q8NI29 283 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 HASPINQ8TF76 798 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 CLPTM1LQ96KA5 538 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 RANBP9Q96S59 729 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 INSM2Q96T92 566 aaPredicted RBP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.46□□□□□ -1.22
ZNF540-206ENST00000589117 CYP4F11Q9HBI6 524 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 MAN1C1Q9NR34 630 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 TMLHEQ9NVH6 421 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 HACD3Q9P035 362 aa7.46□□□□□ -1.22
ZNF540-206ENST00000589117 INPPL1O15357 1258 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 PHGDHO43175 533 aaKnown RBP7.45□□□□□ -1.22
ZNF540-206ENST00000589117 KLF4O43474 513 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 OAZ2O95190 189 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 AMHP03971 560 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 GLDCP23378 1020 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 SLC26A3P40879 764 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 GLRBP48167 497 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 ARCN1P48444 511 aaKnown RBP7.45□□□□□ -1.22
ZNF540-206ENST00000589117 NUMBP49757 651 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 CLCN5P51795 746 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 KPNA1P52294 538 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-206ENST00000589117 WNT3AP56704 352 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 TBX4P57082 545 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 KCNC4Q03721 635 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 BTKQ06187 659 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 MSLNQ13421 630 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-206ENST00000589117 LPIN1Q14693 890 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 MAPRE2Q15555 327 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 KCNA10Q16322 511 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 SLC39A12Q504Y0 691 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 PEAR1Q5VY43 1037 aaPredicted RBP7.45□□□□□ -1.22
ZNF540-206ENST00000589117 AFMIDQ63HM1 303 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 DENND5AQ6IQ26 1287 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 ZFP1Q6P2D0 407 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 CTU1Q7Z7A3 348 aaKnown RBP7.45□□□□□ -1.22
ZNF540-206ENST00000589117 GALNT7Q86SF2 657 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 SLC41A1Q8IVJ1 513 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 CPSF7Q8N684 471 aaKnown RBP7.45□□□□□ -1.22
ZNF540-206ENST00000589117 PIP4K2CQ8TBX8 421 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 AGR3Q8TD06 166 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 KCTD4Q8WVF5 259 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 CASP10Q92851 521 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 PPP2R3CQ969Q6 453 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 BTN2A3PQ96KV6 586 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 C8orf48Q96LL4 319 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 C1QTNF1Q9BXJ1 281 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 GRIP2Q9C0E4 1043 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 SP110Q9HB58 689 aa7.45□□□□□ -1.22
ZNF540-206ENST00000589117 TRPC7Q9HCX4 862 aa7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms