RNA–Protein interactions for RNA: ENST00000588855.5

CLPTM1-209, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 1 (best)

Gene CLPTM1, Length 1,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-209ENST00000588855 WDR87Q6ZQQ6 2873 aa19.1■□□□□ 0.65
CLPTM1-209ENST00000588855 TRPM6Q9BX84 2022 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3DA0A087WVF3 549 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3IA0A087WXS9 549 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3EA0A087X179 549 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3KA0A087X1G2 549 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3FA6NER0 549 aaPredicted RBP19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3LB9A6J9 549 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 ANXA9O76027 345 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 URI1O94763 535 aaPredicted RBP19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3HP0C7X1 549 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 FNTAP49354 379 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 GEMP55040 296 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 WNT3AP56704 352 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 POLR2LP62875 67 aaKnown RBP19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 GALNT3Q14435 633 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 PARP6Q2NL67 630 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3GQ6DHY5 549 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3CQ6IPX1 549 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 ARMCX6Q7L4S7 300 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 LPCAT2Q7L5N7 544 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 SLC41A1Q8IVJ1 513 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 TBC1D3Q8IZP1 549 aaPredicted RBP19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 IPMKQ8NFU5 416 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 ZC3H10Q96K80 434 aaKnown RBP19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 MRGPRX2Q96LB1 330 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 HSPA12BQ96MM6 686 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 PREBQ9HCU5 417 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 PHTF1Q9UMS5 762 aa19.09■□□□□ 0.65
CLPTM1-209ENST00000588855 PLXNA2O75051 1894 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 C10orf142B7Z368 130 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 RIOK3O14730 519 aaKnown RBP19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 RNGTTO60942 597 aaKnown RBP19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 PCDH8O95206 1070 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 CTPS1P17812 591 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 RPL22P35268 128 aaKnown RBP19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 ACTN2P35609 894 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 MMP12P39900 470 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 PTGER3P43115 390 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 SUOXP51687 545 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 EPHB1P54762 984 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 CDK18Q07002 472 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 ELP6Q0PNE2 266 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 MPP3Q13368 585 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 PTPRRQ15256 657 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 ELF2Q15723 593 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 KIAA0895LQ68EN5 471 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 CADM4Q8NFZ8 388 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 IFT43Q96FT9 208 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 FEM1CQ96JP0 617 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 B4GALT6Q9UBX8 382 aa19.08■□□□□ 0.64
CLPTM1-209ENST00000588855 GON4LQ3T8J9 2241 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 NEMP1O14524 444 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 FSBPO95073 299 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 IGHV4-34P06331 123 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 ALPIP09923 528 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 NBL1P41271 181 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 FAM193AP78312 1265 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 LMNB2Q03252 620 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 PRPSAP1Q14558 356 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 QPCTQ16769 361 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 ERAP2Q6P179 960 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 KLHL7Q8IXQ5 586 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 KLHDC8BQ8IXV7 354 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 WRAP53Q9BUR4 548 aaKnown RBP19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 PCED1AQ9H1Q7 454 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 PAK5Q9P286 719 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 CDC23Q9UJX2 597 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 SMG5Q9UPR3 1016 aaKnown RBP19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 ZFR2Q9UPR6 939 aaKnown RBP19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 AAR2Q9Y312 384 aaKnown RBP19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 PPIL1Q9Y3C6 166 aa19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 ARIH1Q9Y4X5 557 aaPredicted RBP19.07■□□□□ 0.64
CLPTM1-209ENST00000588855 A0A0J9YYE9 177 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 A0A1W2PQU0 124 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 NPIPB15A6NHN6 443 aaPredicted RBP19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 METTL12A8MUP2 240 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 A8MX80 341 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 TSPAN6O43657 245 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 RHOBTB1O94844 696 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 NDST3O95803 873 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 TRBC1P01850 177 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 MAT2AP31153 395 aaKnown RBP19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 GRIA4P48058 902 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 DHPSP49366 369 aaPredicted RBP19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 RPL26P61254 145 aaKnown RBP19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 RALGDSQ12967 914 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 OLIG2Q13516 323 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 TRIP13Q15645 432 aaPredicted RBP19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 SEL1L3Q68CR1 1132 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 DPPA4Q7L190 304 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 TRIM69Q86WT6 500 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 KIF18AQ8NI77 898 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 SNX19Q92543 992 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 BIRC7Q96CA5 298 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 RMDN1Q96DB5 314 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 PPP1R2P1Q96PQ5 205 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 MCCC1Q96RQ3 725 aaPredicted RBP19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 FICDQ9BVA6 458 aa19.06■□□□□ 0.64
CLPTM1-209ENST00000588855 FSD1LQ9BXM9 530 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms