RNA–Protein interactions for RNA: ENST00000588555.1

SCAMP4-210, Transcript of secretory carrier membrane protein 4, humanhuman

Gene SCAMP4, Length 1,785 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-210ENST00000588555 KDSRQ06136 332 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 BCL2L1Q07817 233 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 TSTD2Q5T7W7 516 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 DPY19L3Q6ZPD9 716 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 BRSK1Q8TDC3 778 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 BLOC1S5Q8TDH9 187 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 MZB1Q8WU39 189 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 PDCD6IPQ8WUM4 868 aaKnown RBP26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 ATP13A3Q9H7F0 1226 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 PCDHB9Q9Y5E1 797 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 SPO11Q9Y5K1 396 aa26.2■■□□□ 1.78
SCAMP4-210ENST00000588555 FAM155BO75949 473 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 INHBAP08476 426 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 BMP1P13497 986 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 ARCN1P48444 511 aaKnown RBP26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 CCNHP51946 323 aaPredicted RBP26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 NAB1Q13506 487 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 EIF4HQ15056 248 aaKnown RBP26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 SMAD1Q15797 465 aaKnown RBP26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 CNGA3Q16281 694 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 QPCTQ16769 361 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 EXOC3L1Q86VI1 746 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 TERB1Q8NA31 727 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 OR13J1Q8NGT2 312 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 OR2A12Q8NGT7 310 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 CDKL2Q92772 493 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 SMIM14Q96QK8 99 aa26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 UBE2ZQ9H832 354 aaPredicted RBP26.19■■□□□ 1.78
SCAMP4-210ENST00000588555 TTC34A8MYJ7 566 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 KCNA5P22460 613 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 ATP5DP30049 168 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 EIF2DP41214 584 aaKnown RBP26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 ITPRIPL2Q3MIP1 535 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 ARMC12Q5T9G4 340 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 KIAA0930Q6ICG6 404 aaPredicted RBP26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 KCNMB4Q86W47 210 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 RASSF3Q86WH2 238 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 SFTPA1Q8IWL2 248 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 RYBPQ8N488 228 aaPredicted RBP26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 PIH1D2Q8WWB5 315 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 TUBGCP5Q96RT8 1024 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 CPEB1Q9BZB8 566 aaKnown RBP26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 C20orf96Q9NUD7 363 aaPredicted RBP26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 ZFATQ9P243 1243 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 WASH3PC4AMC7 463 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 NR1D1P20393 614 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 SLC8A1P32418 973 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 NNMTP40261 264 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 GYS2P54840 703 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 HSP90AA5PQ58FG0 334 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 PDPK2PQ6A1A2 396 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 NLRP9Q7RTR0 991 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 FAM76AQ8TAV0 307 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 KCTD3Q9Y597 815 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 PSAT1Q9Y617 370 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 ARL5AQ9Y689 179 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 IKBKGQ9Y6K9 419 aa26.18■■□□□ 1.78
SCAMP4-210ENST00000588555 MBTPS2O43462 519 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 BNIP3LO60238 219 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 POP4O95707 220 aaKnown RBP26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 SERPINA4P29622 427 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 GRIA4P48058 902 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 RPL26P61254 145 aaKnown RBP26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 ACVR1Q04771 509 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 SMAD4Q13485 552 aaKnown RBP26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 TEDDM1Q5T9Z0 273 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 EMC10Q5UCC4 262 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 TRABD2AQ86V40 505 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 PEX13Q92968 403 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 RIMKLBQ9ULI2 386 aa26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 RPL26L1Q9UNX3 145 aaKnown RBP26.17■■□□□ 1.78
SCAMP4-210ENST00000588555 VAPBO95292 243 aa26.16■■□□□ 1.78
SCAMP4-210ENST00000588555 HPDP32754 393 aaPredicted RBP26.16■■□□□ 1.78
SCAMP4-210ENST00000588555 LAMB3Q13751 1172 aa26.16■■□□□ 1.78
SCAMP4-210ENST00000588555 CCDC85BQ15834 202 aaPredicted RBP26.16■■□□□ 1.78
SCAMP4-210ENST00000588555 CHST14Q8NCH0 376 aa26.16■■□□□ 1.78
SCAMP4-210ENST00000588555 MDGA1Q8NFP4 955 aa26.16■■□□□ 1.78
SCAMP4-210ENST00000588555 ECHDC3Q96DC8 303 aa26.16■■□□□ 1.78
SCAMP4-210ENST00000588555 AGAP2Q99490 1192 aa26.16■■□□□ 1.78
SCAMP4-210ENST00000588555 C2CD4DB7Z1M9 353 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 AURKAO14965 403 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 TIMM44O43615 452 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 PAMP19021 973 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 ZSWIM9Q86XI8 627 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 KDM1BQ8NB78 822 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 CDX2Q99626 313 aaPredicted RBP26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 ZDHHC6Q9H6R6 413 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 BRD9Q9H8M2 597 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 TICRRQ7Z2Z1 1910 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 PALM2-AKAP2B1ALY0 433 aaPredicted RBP26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 GOLGA8TH3BQL2 631 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 PTPRRQ15256 657 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 PRPF38BQ5VTL8 546 aaKnown RBP26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 PACS1Q6VY07 963 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 Q7L0L9 218 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 CNTN4Q8IWV2 1026 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 GGT7Q9UJ14 662 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 PLA2G4CQ9UP65 541 aa26.15■■□□□ 1.78
SCAMP4-210ENST00000588555 ACTL7BQ9Y614 415 aa26.15■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 118.1 ms