RNA–Protein interactions for RNA: ENST00000588542.5

DDX39A-207, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 1,297 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-207ENST00000588542 FAM118BQ9BPY3 351 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 C1QTNF2Q9BXJ5 285 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 C10orf88Q9H8K7 445 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 HAUS2Q9NVX0 235 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 PCDHB9Q9Y5E1 797 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 RAI2Q9Y5P3 530 aa20.35■□□□□ 0.85
DDX39A-207ENST00000588542 SPTBN4Q9H254 2564 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 A0A1W2PR77 199 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 NEMP1O14524 444 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 SLC31A1O15431 190 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 ZSCAN12O43309 604 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 PGLSO95336 258 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 WNT1P04628 370 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 PDHA1P08559 390 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 ENGP17813 658 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 GRIA4P48058 902 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 POLR2LP62875 67 aaKnown RBP20.34■□□□□ 0.85
DDX39A-207ENST00000588542 SKOR1P84550 965 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 SEMG2Q02383 582 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 LMNB2Q03252 620 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 ELP6Q0PNE2 266 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 CCDC173Q0VFZ6 552 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 NAPEPLDQ6IQ20 393 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 ZSCAN30Q86W11 494 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 PDCD6IPQ8WUM4 868 aaKnown RBP20.34■□□□□ 0.85
DDX39A-207ENST00000588542 HTR3CQ8WXA8 447 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 TEKT5Q96M29 485 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 EDEM2Q9BV94 578 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 SLC17A9Q9BYT1 436 aa20.34■□□□□ 0.85
DDX39A-207ENST00000588542 A0A1B0GVT2 93 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 A0A1W2PQ67 120 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 H7C0C1 242 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 ARHGAP33O14559 1287 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 CDX4O14627 284 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 MTSS1O43312 755 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 MMP20O60882 483 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 PAK4O96013 591 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 CPP00450 1065 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 RBL1P28749 1068 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 CD68P34810 354 aaPredicted RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 CD86P42081 329 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 ATP5OP48047 213 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 EIF3EP60228 445 aaKnown RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 RALGDSQ12967 914 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 GRIK2Q13002 908 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 ARMC12Q5T9G4 340 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 ERAP2Q6P179 960 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 TMEM145Q8NBT3 493 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 PIH1D2Q8WWB5 315 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 ASB12Q8WXK4 309 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 TADA1Q96BN2 335 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 IMP4Q96G21 291 aaKnown RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 WRAP53Q9BUR4 548 aaKnown RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 TDRD1Q9BXT4 1180 aaKnown RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 SLC25A51Q9H1U9 297 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 CARD9Q9H257 536 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 GLOD4Q9HC38 313 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 FZD3Q9NPG1 666 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 TRMT1Q9NXH9 659 aaKnown RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 PYCARDQ9ULZ3 195 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 PHTF1Q9UMS5 762 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 CA5BQ9Y2D0 317 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 R3HDM2Q9Y2K5 976 aaKnown RBP20.33■□□□□ 0.85
DDX39A-207ENST00000588542 PPIL1Q9Y3C6 166 aa20.33■□□□□ 0.85
DDX39A-207ENST00000588542 LOC105378220A0A1B0GUY1 285 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-207ENST00000588542 PRAMEF26H0Y7S4 382 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 KCNK3O14649 394 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 RAD51BO15315 384 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 PRLP01236 227 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 RBP3P10745 1247 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 HNRNPA2B1P22626 353 aaKnown RBP20.32■□□□□ 0.84
DDX39A-207ENST00000588542 CD38P28907 300 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 SEL1L2Q5TEA6 688 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 ZNF567Q8N184 647 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 CXorf40AQ8TE69 158 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 RBM15Q96T37 977 aaKnown RBP eCLIP20.32■□□□□ 0.844e-8■■■■■ 32.2
DDX39A-207ENST00000588542 KLF6Q99612 283 aaPredicted RBP20.32■□□□□ 0.84
DDX39A-207ENST00000588542 MYOCQ99972 504 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 AASDHPPTQ9NRN7 309 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 CHKBQ9Y259 395 aa20.32■□□□□ 0.84
DDX39A-207ENST00000588542 ASCC3Q8N3C0 2202 aaKnown RBP20.32■□□□□ 0.84
DDX39A-207ENST00000588542 DCHS1Q96JQ0 3298 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 GOLGA6L9A6NEM1 432 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 USP27XA6NNY8 438 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 VILLO15195 856 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 FAM193AP78312 1265 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 ARHGAP8P85298 464 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 PTPRRQ15256 657 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 TEAD4Q15561 434 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 DPPA4Q7L190 304 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 SLC13A5Q86YT5 568 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-207ENST00000588542 PAF1Q8N7H5 531 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 TTC13Q8NBP0 860 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 LENG8Q96PV6 779 aaPredicted RBP20.31■□□□□ 0.84
DDX39A-207ENST00000588542 VAT1Q99536 393 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 USP29Q9HBJ7 922 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 B4GALT6Q9UBX8 382 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 ANKRD6Q9Y2G4 727 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 COQ6Q9Y2Z9 468 aa20.31■□□□□ 0.84
DDX39A-207ENST00000588542 H0Y8X5 98 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms