RNA–Protein interactions for RNA: ENST00000588483.1

TPM4-209, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-209ENST00000588483 PRAMEF14Q5SWL7 426 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 Q6ZSR6 202 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 DPPA4Q7L190 304 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 PTAR1Q7Z6K3 402 aaPredicted RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 SLCO6A1Q86UG4 719 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 PARGQ86W56 976 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 NSMCE1Q8WV22 266 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 CALR3Q96L12 384 aaKnown RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 TBATAQ96M53 351 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 MYOCQ99972 504 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 TMEM121BQ9BXQ6 578 aaPredicted RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 DDX56Q9NY93 547 aaKnown RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 DTLQ9NZJ0 730 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 PPIL1Q9Y3C6 166 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 PCDHGA1Q9Y5H4 931 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 KMT2BQ9UMN6 2715 aaPredicted RBP10.57□□□□□ -0.72
TPM4-209ENST00000588483 PTPRBP23467 1997 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 LAMA5O15230 3695 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 KNTC1P50748 2209 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 IGF2RP11717 2491 aa10.57□□□□□ -0.72
TPM4-209ENST00000588483 DMXL2Q8TDJ6 3036 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 BTNL10A8MVZ5 291 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 ZZEF1O43149 2961 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 PSTPIP1O43586 416 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 FZD6O60353 706 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 PIAS2O75928 621 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 NDUFA10O95299 355 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 GIMD1P0DJR0 217 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 C6P13671 934 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 ZFXP17010 805 aaPredicted RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 XPAP23025 273 aaPredicted RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 DGKAP23743 735 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 CDC25BP30305 580 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 GJC1P36383 396 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 LIG3P49916 1009 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 PEX5P50542 639 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 HNRNPKP61978 463 aaKnown RBP eCLIP10.56□□□□□ -0.72
TPM4-209ENST00000588483 GBE1Q04446 702 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 PPIDQ08752 370 aaKnown RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 SLC10A2Q12908 348 aaPredicted RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 FOXC1Q12948 553 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 CFAP58Q5T655 872 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 C11orf63Q6NUN7 778 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 LIPIQ6XZB0 460 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 GATAD2AQ86YP4 633 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 TMTC1Q8IUR5 882 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 RHOT1Q8IXI2 618 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 CBARPQ8N350 705 aaPredicted RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 SLC25A45Q8N413 288 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 CNTNAP3BQ96NU0 1288 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 OLFM3Q96PB7 478 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 MCCC1Q96RQ3 725 aaPredicted RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 ANP32EQ9BTT0 268 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 SCNM1Q9BWG6 230 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 CNTNAP3Q9BZ76 1288 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 POLR1EQ9GZS1 481 aaKnown RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 NOD2Q9HC29 1040 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 LUC7LQ9NQ29 371 aaKnown RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 SCUBE2Q9NQ36 999 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 FTSJ1Q9UET6 329 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 MSRB2Q9Y3D2 182 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 PCDHA13Q9Y5I0 950 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 LRP4O75096 1905 aa10.56□□□□□ -0.72
TPM4-209ENST00000588483 TDRD6O60522 2096 aaKnown RBP10.56□□□□□ -0.72
TPM4-209ENST00000588483 PLXNB3Q9ULL4 1909 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 LRRD1A4D1F6 860 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 TMEM110-MUSTN1A8MSY1 372 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 PSMD11O00231 422 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 HYAL3O43820 417 aaPredicted RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 PGLSO95336 258 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 TOP3BO95985 862 aaKnown RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 C1SP09871 688 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 ATXN1LP0C7T5 689 aaKnown RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 CDK4P11802 303 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 GM2AP17900 193 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 COMTP21964 271 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 NFKBIAP25963 317 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 IFI35P80217 286 aaPredicted RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 TRAF2Q12933 501 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 ZNF211Q13398 564 aaPredicted RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 ILKQ13418 452 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 MTM1Q13496 603 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 PTK2BQ14289 1009 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 LRRC14Q15048 493 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 SPA17Q15506 151 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 WSCD2Q2TBF2 565 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 PROX2Q3B8N5 592 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 TPRG1LQ5T0D9 272 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 MACC1Q6ZN28 852 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 TMEM139Q8IV31 216 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 RAVER1Q8IY67 606 aaKnown RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 OR4C6Q8NH72 309 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 GATA6Q92908 595 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 WRAP53Q9BUR4 548 aaKnown RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 BRD8Q9H0E9 1235 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 MBNL1Q9NR56 388 aaKnown RBP10.55□□□□□ -0.72
TPM4-209ENST00000588483 HAUS2Q9NVX0 235 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 KCTD5Q9NXV2 234 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 NLGN3Q9NZ94 848 aa10.55□□□□□ -0.72
TPM4-209ENST00000588483 IMPACTQ9P2X3 320 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms