RNA–Protein interactions for RNA: ENST00000587888.5

ERCC1-205, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 5

Gene ERCC1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-205ENST00000587888 AGPAT1Q99943 283 aa14.28□□□□□ -0.12
ERCC1-205ENST00000587888 EPB41L5Q9HCM4 733 aa14.28□□□□□ -0.12
ERCC1-205ENST00000587888 GPATCH2LQ9NWQ4 482 aa14.28□□□□□ -0.12
ERCC1-205ENST00000587888 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.28□□□□□ -0.12
ERCC1-205ENST00000587888 RABGEF1Q9UJ41 708 aa14.28□□□□□ -0.12
ERCC1-205ENST00000587888 WASH4PA8MWX3 477 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 NTN3O00634 580 aaPredicted RBP14.27□□□□□ -0.13
ERCC1-205ENST00000587888 RASGRP1O95267 797 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 TNFP01375 233 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 C6P13671 934 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 SUOXP51687 545 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 TPI1P60174 286 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 KIAA1614Q5VZ46 1190 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 LVRNQ6Q4G3 990 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 MON1BQ7L1V2 547 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 B3GNT8Q7Z7M8 397 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 GKN2Q86XP6 184 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 PAF1Q8N7H5 531 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 Q8N9G6 341 aaPredicted RBP14.27□□□□□ -0.13
ERCC1-205ENST00000587888 HCAR2Q8TDS4 363 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 WBP1Q96G27 269 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 GFM1Q96RP9 751 aaKnown RBP14.27□□□□□ -0.13
ERCC1-205ENST00000587888 CNPY3Q9BT09 278 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 FOXP3Q9BZS1 431 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 SEMA4CQ9C0C4 833 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 KLQ9UEF7 1012 aa14.27□□□□□ -0.13
ERCC1-205ENST00000587888 PTPRQQ9UMZ3 2332 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 RP1P56715 2156 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 TCRBV5S1A1TA0A578 114 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 CAPN8A6NHC0 703 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 A8MX80 341 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 FGF10O15520 208 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-205ENST00000587888 RPLP0P05388 317 aaKnown RBP14.26□□□□□ -0.13
ERCC1-205ENST00000587888 PAPOLAP51003 745 aaKnown RBP14.26□□□□□ -0.13
ERCC1-205ENST00000587888 PDX1P52945 283 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 UBXN1Q04323 297 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 GRM3Q14832 879 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 NFATC4Q14934 902 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 KCTD16Q68DU8 428 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 ACAD10Q6JQN1 1059 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 RAB11FIP2Q7L804 512 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 SRLQ86TD4 932 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 ZSWIM9Q86XI8 627 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 JAMLQ86YT9 394 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 SDR16C5Q8N3Y7 309 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 FBXO39Q8N4B4 442 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 PLA2G15Q8NCC3 412 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 TTC9Q92623 222 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 ZNF641Q96N77 438 aaPredicted RBP14.26□□□□□ -0.13
ERCC1-205ENST00000587888 SLC39A8Q9C0K1 460 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 PDFQ9HBH1 243 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 SSUH2Q9Y2M2 353 aa14.26□□□□□ -0.13
ERCC1-205ENST00000587888 TMCO5BA8MYB1 307 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 K7ENP7 123 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 PLD2O14939 933 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 DAPK3O43293 454 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 PRAMEF11O60813 436 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 PALMO75781 387 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 KRT10P13645 584 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 DESP17661 470 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 CDK11BP21127 795 aaKnown RBP14.25□□□□□ -0.13
ERCC1-205ENST00000587888 TNFAIP3P21580 790 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 SLC5A2P31639 672 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 RGRP47804 291 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 AIF1P55008 147 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 SKOR1P84550 965 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 OGDHQ02218 1023 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 CLN3Q13286 438 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 KIF26BQ2KJY2 2108 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 PPP1R15BQ5SWA1 713 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 INO80CQ6PI98 192 aaPredicted RBP14.25□□□□□ -0.13
ERCC1-205ENST00000587888 BRAT1Q6PJG6 821 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 TAF8Q7Z7C8 310 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 CLEC14AQ86T13 490 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 MCOLN2Q8IZK6 566 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 TSEN2Q8NCE0 465 aaKnown RBP14.25□□□□□ -0.13
ERCC1-205ENST00000587888 ANKRD20A12PQ8NF67 263 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 ATL2Q8NHH9 583 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 WDR92Q96MX6 357 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 STRADBQ9C0K7 418 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 LRRN3Q9H3W5 708 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 DHX35Q9H5Z1 703 aaKnown RBP14.25□□□□□ -0.13
ERCC1-205ENST00000587888 LRRC19Q9H756 370 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 MRPL40Q9NQ50 206 aaKnown RBP14.25□□□□□ -0.13
ERCC1-205ENST00000587888 LIMA1Q9UHB6 759 aaKnown RBP14.25□□□□□ -0.13
ERCC1-205ENST00000587888 PCSK1NQ9UHG2 260 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 AP4E1Q9UPM8 1137 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 ATP8A1Q9Y2Q0 1164 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 LRRK1Q38SD2 2015 aa14.25□□□□□ -0.13
ERCC1-205ENST00000587888 GCN1Q92616 2671 aaKnown RBP14.24□□□□□ -0.13
ERCC1-205ENST00000587888 A0A1W2PQM1 296 aa14.24□□□□□ -0.13
ERCC1-205ENST00000587888 TSPAN11A1L157 253 aa14.24□□□□□ -0.13
ERCC1-205ENST00000587888 ARHGAP42A6NI28 874 aa14.24□□□□□ -0.13
ERCC1-205ENST00000587888 J3QKU1 62 aa14.24□□□□□ -0.13
ERCC1-205ENST00000587888 EEF2KO00418 725 aaKnown RBP14.24□□□□□ -0.13
ERCC1-205ENST00000587888 RECQL5O94762 991 aaPredicted RBP14.24□□□□□ -0.13
ERCC1-205ENST00000587888 ITGA2BP08514 1039 aa14.24□□□□□ -0.13
ERCC1-205ENST00000587888 HGFP14210 728 aa14.24□□□□□ -0.13
ERCC1-205ENST00000587888 UGT1A5P35504 534 aa14.24□□□□□ -0.13
ERCC1-205ENST00000587888 MMP12P39900 470 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms